RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 K7ESF4 209 aa15.33■□□□□ 0.04
VMP1-206ENST00000587945 ACTN4O43707 911 aaKnown RBP15.33■□□□□ 0.04
VMP1-206ENST00000587945 GNL1P36915 607 aaPredicted RBP15.33■□□□□ 0.04
VMP1-206ENST00000587945 GRIK1P39086 918 aa15.33■□□□□ 0.04
VMP1-206ENST00000587945 MAGEA11P43364 429 aa15.33■□□□□ 0.04
VMP1-206ENST00000587945 USP46P62068 366 aa15.33■□□□□ 0.04
VMP1-206ENST00000587945 SNRPFP62306 86 aaKnown RBP15.33■□□□□ 0.04
VMP1-206ENST00000587945 SRSF5Q13243 272 aaKnown RBP15.33■□□□□ 0.04
VMP1-206ENST00000587945 KNOP1Q1ED39 458 aaKnown RBP15.33■□□□□ 0.04
VMP1-206ENST00000587945 MDH1BQ5I0G3 518 aa15.33■□□□□ 0.04
VMP1-206ENST00000587945 ATL3Q6DD88 541 aa15.33■□□□□ 0.04
VMP1-206ENST00000587945 CC2D1AQ6P1N0 951 aaPredicted RBP15.33■□□□□ 0.04
VMP1-206ENST00000587945 PKN3Q6P5Z2 889 aa15.33■□□□□ 0.04
VMP1-206ENST00000587945 CEP57L1Q8IYX8 460 aa15.33■□□□□ 0.04
VMP1-206ENST00000587945 ARL14EPQ8N8R7 260 aaPredicted RBP15.33■□□□□ 0.04
VMP1-206ENST00000587945 OR6B3Q8NGW1 331 aa15.33■□□□□ 0.04
VMP1-206ENST00000587945 PLEKHO2Q8TD55 490 aa15.33■□□□□ 0.04
VMP1-206ENST00000587945 ELMO3Q96BJ8 720 aa15.33■□□□□ 0.04
VMP1-206ENST00000587945 PCED1BQ96HM7 432 aa15.33■□□□□ 0.04
VMP1-206ENST00000587945 SNX25Q9H3E2 840 aa15.33■□□□□ 0.04
VMP1-206ENST00000587945 KIF9Q9HAQ2 790 aa15.33■□□□□ 0.04
VMP1-206ENST00000587945 CFAP45Q9UL16 551 aa15.33■□□□□ 0.04
VMP1-206ENST00000587945 ZNF292O60281 2723 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 FRYLO94915 3013 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 PATJQ8NI35 1801 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 TRAV19A0A0A6YYK7 116 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 SOBPA7XYQ1 873 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 HRO43593 1189 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 KLRC4O43908 158 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 EXOC3O60645 756 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 CKMP06732 381 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 PDIA4P13667 645 aaKnown RBP15.32■□□□□ 0.04
VMP1-206ENST00000587945 MYL6P60660 151 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 FAM160A1Q05DH4 1040 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 STK4Q13043 487 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 TRPC3Q13507 836 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 ZNF268Q14587 947 aaPredicted RBP15.32■□□□□ 0.04
VMP1-206ENST00000587945 MTF1Q14872 753 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 ZNF77Q15935 545 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 WDR72Q3MJ13 1102 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 FSTL4Q6MZW2 842 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 VSTM1Q6UX27 236 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 PRR23BQ6ZRT6 265 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 MYCBPAPQ8TBZ2 947 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 SECISBP2LQ93073 1101 aaKnown RBP15.32■□□□□ 0.04
VMP1-206ENST00000587945 PAGE5Q96GU1 130 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 DPEP3Q9H4B8 488 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 FBRSL1Q9HCM7 1045 aaKnown RBP15.32■□□□□ 0.04
VMP1-206ENST00000587945 GCNT4Q9P109 453 aa15.32■□□□□ 0.04
VMP1-206ENST00000587945 NXF1Q9UBU9 619 aaKnown RBP15.32■□□□□ 0.04
VMP1-206ENST00000587945 A0A1B0GVL5 298 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 F8VP50 259 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 TACC1O75410 805 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 PAPSS2O95340 614 aaPredicted RBP15.31■□□□□ 0.04
VMP1-206ENST00000587945 EGFP01133 1207 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 USP17L7P0C7H9 530 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 SLFN14P0C7P3 912 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 TGM1P22735 817 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 CACNA2D1P54289 1103 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 TNNC1P63316 161 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 GRSF1Q12849 480 aaKnown RBP eCLIP15.31■□□□□ 0.04
VMP1-206ENST00000587945 PDGFRLQ15198 375 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 MAPRE1Q15691 268 aaKnown RBP15.31■□□□□ 0.04
VMP1-206ENST00000587945 RSPO4Q2I0M5 234 aaPredicted RBP15.31■□□□□ 0.04
VMP1-206ENST00000587945 TMEM196Q5HYL7 178 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 ERMP1Q7Z2K6 904 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 C12orf56Q8IXR9 622 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 FSIP1Q8NA03 581 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 KIAA0895Q8NCT3 520 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 SH3RF2Q8TEC5 729 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 SPATA17Q96L03 361 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 XYLT2Q9H1B5 865 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 PARD6AQ9NPB6 346 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 POLR3BQ9NW08 1133 aaPredicted RBP15.31■□□□□ 0.04
VMP1-206ENST00000587945 DUS2Q9NX74 493 aaKnown RBP15.31■□□□□ 0.04
VMP1-206ENST00000587945 GMEB2Q9UKD1 530 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 RAB23Q9ULC3 237 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 USP18Q9UMW8 372 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 WNT6Q9Y6F9 365 aa15.31■□□□□ 0.04
VMP1-206ENST00000587945 CLDN5O00501 218 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 TRDMT1O14717 391 aaKnown RBP15.3■□□□□ 0.04
VMP1-206ENST00000587945 PHACTR2O75167 634 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 PFKFB1P16118 471 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 PTPN1P18031 435 aaKnown RBP15.3■□□□□ 0.04
VMP1-206ENST00000587945 HDCP19113 662 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 ANXA13P27216 316 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 PXNP49023 591 aaPredicted RBP15.3■□□□□ 0.04
VMP1-206ENST00000587945 GALK1P51570 392 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 CDH8P55286 799 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 FOXK2Q01167 660 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 USP4Q13107 963 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 BIRC3Q13489 604 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 SIM2Q14190 667 aaPredicted RBP15.3■□□□□ 0.04
VMP1-206ENST00000587945 KCNB1Q14721 858 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 KMT5BQ4FZB7 885 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 TDRD10Q5VZ19 366 aaKnown RBP15.3■□□□□ 0.04
VMP1-206ENST00000587945 DENND5BQ6ZUT9 1274 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 DGLUCYQ7Z3D6 616 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 LONP2Q86WA8 852 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 SYNPOQ8N3V7 929 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms