RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 TSSK4Q6SA08 328 aa22.36■■□□□ 1.17
CCDC42-203ENST00000581598 SYNPOQ8N3V7 929 aa22.36■■□□□ 1.17
CCDC42-203ENST00000581598 STKLD1Q8NE28 680 aa22.36■■□□□ 1.17
CCDC42-203ENST00000581598 MYLPFQ96A32 169 aa22.36■■□□□ 1.17
CCDC42-203ENST00000581598 CCDC127Q96BQ5 260 aa22.36■■□□□ 1.17
CCDC42-203ENST00000581598 PAGE5Q96GU1 130 aa22.36■■□□□ 1.17
CCDC42-203ENST00000581598 MMS19Q96T76 1030 aa22.36■■□□□ 1.17
CCDC42-203ENST00000581598 GKN1Q9NS71 199 aa22.36■■□□□ 1.17
CCDC42-203ENST00000581598 CCL26Q9Y258 94 aa22.36■■□□□ 1.17
CCDC42-203ENST00000581598 GPR179Q6PRD1 2367 aa22.36■■□□□ 1.17
CCDC42-203ENST00000581598 EXOC3O60645 756 aa22.35■■□□□ 1.17
CCDC42-203ENST00000581598 CXCL12P48061 93 aa22.35■■□□□ 1.17
CCDC42-203ENST00000581598 AP3M2P53677 418 aa22.35■■□□□ 1.17
CCDC42-203ENST00000581598 TNK2Q07912 1038 aa22.35■■□□□ 1.17
CCDC42-203ENST00000581598 WDR44Q5JSH3 913 aa22.35■■□□□ 1.17
CCDC42-203ENST00000581598 SLC9A9Q8IVB4 645 aa22.35■■□□□ 1.17
CCDC42-203ENST00000581598 GRAMD1CQ8IYS0 662 aa22.35■■□□□ 1.17
CCDC42-203ENST00000581598 MYCBPAPQ8TBZ2 947 aa22.35■■□□□ 1.17
CCDC42-203ENST00000581598 ZNF516Q92618 1163 aa22.35■■□□□ 1.17
CCDC42-203ENST00000581598 VRTNQ9H8Y1 702 aa22.35■■□□□ 1.17
CCDC42-203ENST00000581598 DMAC2Q9NW81 257 aa22.35■■□□□ 1.17
CCDC42-203ENST00000581598 HPSEQ9Y251 543 aa22.35■■□□□ 1.17
CCDC42-203ENST00000581598 WDR87Q6ZQQ6 2873 aa22.34■■□□□ 1.17
CCDC42-203ENST00000581598 PFKFB1P16118 471 aa22.34■■□□□ 1.17
CCDC42-203ENST00000581598 GNL1P36915 607 aaPredicted RBP22.34■■□□□ 1.17
CCDC42-203ENST00000581598 PSMC1P62191 440 aaKnown RBP22.34■■□□□ 1.17
CCDC42-203ENST00000581598 CLDN10P78369 228 aa22.34■■□□□ 1.17
CCDC42-203ENST00000581598 FAM160A1Q05DH4 1040 aa22.34■■□□□ 1.17
CCDC42-203ENST00000581598 STK4Q13043 487 aa22.34■■□□□ 1.17
CCDC42-203ENST00000581598 CCINQ13939 588 aa22.34■■□□□ 1.17
CCDC42-203ENST00000581598 SCN4BQ8IWT1 228 aa22.34■■□□□ 1.17
CCDC42-203ENST00000581598 FSIP1Q8NA03 581 aa22.34■■□□□ 1.17
CCDC42-203ENST00000581598 KIAA0895Q8NCT3 520 aa22.34■■□□□ 1.17
CCDC42-203ENST00000581598 SYAP1Q96A49 352 aaPredicted RBP22.34■■□□□ 1.17
CCDC42-203ENST00000581598 MRPL45Q9BRJ2 306 aaKnown RBP22.34■■□□□ 1.17
CCDC42-203ENST00000581598 XYLT2Q9H1B5 865 aa22.34■■□□□ 1.17
CCDC42-203ENST00000581598 HPS4Q9NQG7 708 aa22.34■■□□□ 1.17
CCDC42-203ENST00000581598 EXOC1Q9NV70 894 aa22.34■■□□□ 1.17
CCDC42-203ENST00000581598 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.33■■□□□ 1.17
CCDC42-203ENST00000581598 FAM237AA0A1B0GTK4 181 aa22.33■■□□□ 1.17
CCDC42-203ENST00000581598 GOLGA6L22H0YM25 854 aa22.33■■□□□ 1.17
CCDC42-203ENST00000581598 PDGFRBP09619 1106 aa22.33■■□□□ 1.17
CCDC42-203ENST00000581598 TCF3P15923 654 aa22.33■■□□□ 1.17
CCDC42-203ENST00000581598 PFKLP17858 780 aa22.33■■□□□ 1.17
CCDC42-203ENST00000581598 TNNC1P63316 161 aa22.33■■□□□ 1.17
CCDC42-203ENST00000581598 TRPC3Q13507 836 aa22.33■■□□□ 1.17
CCDC42-203ENST00000581598 RUNX3Q13761 415 aa22.33■■□□□ 1.17
CCDC42-203ENST00000581598 PON2Q15165 354 aa22.33■■□□□ 1.17
CCDC42-203ENST00000581598 WDR72Q3MJ13 1102 aa22.33■■□□□ 1.17
CCDC42-203ENST00000581598 TTC8Q8TAM2 541 aa22.33■■□□□ 1.17
CCDC42-203ENST00000581598 PARD3BQ8TEW8 1205 aa22.33■■□□□ 1.17
CCDC42-203ENST00000581598 PCED1BQ96HM7 432 aa22.33■■□□□ 1.17
CCDC42-203ENST00000581598 SNX25Q9H3E2 840 aa22.33■■□□□ 1.17
CCDC42-203ENST00000581598 EHD2Q9NZN4 543 aa22.33■■□□□ 1.17
CCDC42-203ENST00000581598 GCNT4Q9P109 453 aa22.33■■□□□ 1.17
CCDC42-203ENST00000581598 NME7Q9Y5B8 376 aa22.33■■□□□ 1.17
CCDC42-203ENST00000581598 HELZP42694 1942 aaKnown RBP22.33■■□□□ 1.16
CCDC42-203ENST00000581598 TRAV19A0A0A6YYK7 116 aa22.32■■□□□ 1.16
CCDC42-203ENST00000581598 A0A1B0GVL5 298 aa22.32■■□□□ 1.16
CCDC42-203ENST00000581598 TRIM66O15016 1216 aa22.32■■□□□ 1.16
CCDC42-203ENST00000581598 USP17L7P0C7H9 530 aa22.32■■□□□ 1.16
CCDC42-203ENST00000581598 BDNFP23560 247 aa22.32■■□□□ 1.16
CCDC42-203ENST00000581598 SATB1Q01826 763 aa22.32■■□□□ 1.16
CCDC42-203ENST00000581598 PDGFRLQ15198 375 aa22.32■■□□□ 1.16
CCDC42-203ENST00000581598 KMT5BQ4FZB7 885 aa22.32■■□□□ 1.16
CCDC42-203ENST00000581598 CC2D1AQ6P1N0 951 aaPredicted RBP22.32■■□□□ 1.16
CCDC42-203ENST00000581598 RIN3Q8TB24 985 aa22.32■■□□□ 1.16
CCDC42-203ENST00000581598 PLEKHO2Q8TD55 490 aa22.32■■□□□ 1.16
CCDC42-203ENST00000581598 C8orf48Q96LL4 319 aa22.32■■□□□ 1.16
CCDC42-203ENST00000581598 HINFPQ9BQA5 517 aa22.32■■□□□ 1.16
CCDC42-203ENST00000581598 TTLL2Q9BWV7 592 aa22.32■■□□□ 1.16
CCDC42-203ENST00000581598 KCTD10Q9H3F6 313 aa22.32■■□□□ 1.16
CCDC42-203ENST00000581598 RBM12Q9NTZ6 932 aaKnown RBP22.32■■□□□ 1.16
CCDC42-203ENST00000581598 LMBRD1Q9NUN5 540 aa22.32■■□□□ 1.16
CCDC42-203ENST00000581598 SMG5Q9UPR3 1016 aaKnown RBP22.32■■□□□ 1.16
CCDC42-203ENST00000581598 PDXKO00764 312 aa22.31■■□□□ 1.16
CCDC42-203ENST00000581598 ANXA13P27216 316 aa22.31■■□□□ 1.16
CCDC42-203ENST00000581598 GRIK1P39086 918 aa22.31■■□□□ 1.16
CCDC42-203ENST00000581598 ID4P47928 161 aa22.31■■□□□ 1.16
CCDC42-203ENST00000581598 PDE6CP51160 858 aa22.31■■□□□ 1.16
CCDC42-203ENST00000581598 MYL6P60660 151 aa22.31■■□□□ 1.16
CCDC42-203ENST00000581598 NOP14P78316 857 aaKnown RBP22.31■■□□□ 1.16
CCDC42-203ENST00000581598 FOXK2Q01167 660 aa22.31■■□□□ 1.16
CCDC42-203ENST00000581598 AMPD2Q01433 879 aa22.31■■□□□ 1.16
CCDC42-203ENST00000581598 CYP27A1Q02318 531 aa22.31■■□□□ 1.16
CCDC42-203ENST00000581598 USP4Q13107 963 aa22.31■■□□□ 1.16
CCDC42-203ENST00000581598 ZNF77Q15935 545 aa22.31■■□□□ 1.16
CCDC42-203ENST00000581598 Q6ZS52 159 aa22.31■■□□□ 1.16
CCDC42-203ENST00000581598 DENND5BQ6ZUT9 1274 aa22.31■■□□□ 1.16
CCDC42-203ENST00000581598 OR6B3Q8NGW1 331 aa22.31■■□□□ 1.16
CCDC42-203ENST00000581598 A0A1W2PQ27 194 aa22.3■■□□□ 1.16
CCDC42-203ENST00000581598 A0A1W2PQ64 194 aa22.3■■□□□ 1.16
CCDC42-203ENST00000581598 A0A1W2PQD8 194 aa22.3■■□□□ 1.16
CCDC42-203ENST00000581598 TRDMT1O14717 391 aaKnown RBP22.3■■□□□ 1.16
CCDC42-203ENST00000581598 PTPN1P18031 435 aaKnown RBP22.3■■□□□ 1.16
CCDC42-203ENST00000581598 HOXA6P31267 233 aa22.3■■□□□ 1.16
CCDC42-203ENST00000581598 PPP3CCP48454 512 aa22.3■■□□□ 1.16
CCDC42-203ENST00000581598 MTF1Q14872 753 aa22.3■■□□□ 1.16
CCDC42-203ENST00000581598 TMEM196Q5HYL7 178 aa22.3■■□□□ 1.16
CCDC42-203ENST00000581598 MDH1BQ5I0G3 518 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms