RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 NUMBLQ9Y6R0 609 aa13.44□□□□□ -0.26
SNORD55-201ENST00000581525 A0A1W2PRU2 124 aa13.43□□□□□ -0.26
SNORD55-201ENST00000581525 AFPP02771 609 aaKnown RBP13.43□□□□□ -0.26
SNORD55-201ENST00000581525 CACNA2D1P54289 1103 aa13.43□□□□□ -0.26
SNORD55-201ENST00000581525 TEAD2Q15562 447 aa13.43□□□□□ -0.26
SNORD55-201ENST00000581525 DCAF17Q5H9S7 520 aaPredicted RBP13.43□□□□□ -0.26
SNORD55-201ENST00000581525 TANGO2Q6ICL3 276 aa13.43□□□□□ -0.26
SNORD55-201ENST00000581525 SCARA5Q6ZMJ2 495 aa13.43□□□□□ -0.26
SNORD55-201ENST00000581525 ACOT1Q86TX2 421 aa13.43□□□□□ -0.26
SNORD55-201ENST00000581525 ENOX1Q8TC92 643 aaKnown RBP13.43□□□□□ -0.26
SNORD55-201ENST00000581525 ING5Q8WYH8 240 aa13.43□□□□□ -0.26
SNORD55-201ENST00000581525 PLA2G2FQ9BZM2 168 aa13.43□□□□□ -0.26
SNORD55-201ENST00000581525 ZNF518BQ9C0D4 1074 aa13.43□□□□□ -0.26
SNORD55-201ENST00000581525 TASP1Q9H6P5 420 aa13.43□□□□□ -0.26
SNORD55-201ENST00000581525 MMRN2Q9H8L6 949 aa13.43□□□□□ -0.26
SNORD55-201ENST00000581525 TRPV5Q9NQA5 729 aa13.43□□□□□ -0.26
SNORD55-201ENST00000581525 CISHQ9NSE2 258 aa13.43□□□□□ -0.26
SNORD55-201ENST00000581525 HMGXB4Q9UGU5 601 aa13.43□□□□□ -0.26
SNORD55-201ENST00000581525 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.43□□□□□ -0.26
SNORD55-201ENST00000581525 GTPBP10A4D1E9 387 aaKnown RBP13.42□□□□□ -0.26
SNORD55-201ENST00000581525 TMEM221A6NGB7 291 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 F8VP50 259 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 M0R296 226 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 CLDN5O00501 218 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 TADA3O75528 432 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 GJA1P17302 382 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 PFKLP17858 780 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 TBXAS1P24557 533 aaPredicted RBP13.42□□□□□ -0.26
SNORD55-201ENST00000581525 GRIK1P39086 918 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 PPP3CCP48454 512 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 CDR1P51861 262 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 RAD23BP54727 409 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 CYP27A1Q02318 531 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 GCNT1Q02742 428 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 CUL2Q13617 745 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 SDHAF4Q5VUM1 108 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 SNX30Q5VWJ9 437 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 DENND5BQ6ZUT9 1274 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 FAM35AQ86V20 835 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 MON1AQ86VX9 555 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 MFSD6LQ8IWD5 586 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 C12orf29Q8N999 325 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 SLC4A11Q8NBS3 891 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 ZMIZ2Q8NF64 920 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 GPR152Q8TDT2 470 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 JAKMIP2Q96AA8 810 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 CNOT6LQ96LI5 555 aaKnown RBP13.42□□□□□ -0.26
SNORD55-201ENST00000581525 SLC46A2Q9BY10 475 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 UBXN6Q9BZV1 441 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 ATXN3LQ9H3M9 355 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 SMOC2Q9H3U7 446 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 ZFP14Q9HCL3 533 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 PNPLA8Q9NP80 782 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 EHD2Q9NZN4 543 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 CNTN6Q9UQ52 1028 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 PTPRDP23468 1912 aa13.42□□□□□ -0.26
SNORD55-201ENST00000581525 NARSO43776 548 aaKnown RBP13.41□□□□□ -0.26
SNORD55-201ENST00000581525 TCF3P15923 654 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 ACO1P21399 889 aaKnown RBP13.41□□□□□ -0.26
SNORD55-201ENST00000581525 MLLT6P55198 1093 aaPredicted RBP13.41□□□□□ -0.26
SNORD55-201ENST00000581525 FCHO2Q0JRZ9 810 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 CETN1Q12798 172 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 ZNF268Q14587 947 aaPredicted RBP13.41□□□□□ -0.26
SNORD55-201ENST00000581525 TAF12Q16514 161 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 ARHGAP15Q53QZ3 475 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 CCDC183Q5T5S1 534 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 ARHGAP17Q68EM7 881 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 HFE2Q6ZVN8 426 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 ARID3BQ8IVW6 561 aaPredicted RBP13.41□□□□□ -0.26
SNORD55-201ENST00000581525 SCN4BQ8IWT1 228 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 CMTM8Q8IZV2 173 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 ZSCAN18Q8TBC5 510 aaPredicted RBP13.41□□□□□ -0.26
SNORD55-201ENST00000581525 FAM200AQ8TCP9 573 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 DEPDC1BQ8WUY9 529 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 OVCA2Q8WZ82 227 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 CYFIP2Q96F07 1278 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 SMARCD1Q96GM5 515 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 TMEM176AQ96HP8 235 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 SMOQ99835 787 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 KIAA1257Q9ULG3 409 aa13.41□□□□□ -0.26
SNORD55-201ENST00000581525 NCANO14594 1321 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 ATP8B3O60423 1300 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 HHLA1C9JL84 531 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 BEST1O76090 585 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 RTN3O95197 1032 aaPredicted RBP13.4□□□□□ -0.26
SNORD55-201ENST00000581525 ZDHHC11BP0C7U3 371 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 USP46P62068 366 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 YWHAEP62258 255 aaKnown RBP13.4□□□□□ -0.26
SNORD55-201ENST00000581525 GPC5P78333 572 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 STXBP5Q5T5C0 1151 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 GPR158Q5T848 1215 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 DPY19L2P1Q6NXN4 242 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 VITQ6UXI7 678 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 NUP93Q8N1F7 819 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 KIAA1958Q8N8K9 716 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 SLC2A14Q8TDB8 520 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 RSPRY1Q96DX4 576 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 NT5C1BQ96P26 610 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 LRRC3BQ96PB8 259 aa13.4□□□□□ -0.26
SNORD55-201ENST00000581525 KCNK16Q96T55 309 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms