RNA–Protein interactions for RNA: ENST00000577565.1

SNRPN-208, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-208ENST00000577565 EPB41L2O43491 1005 aaKnown RBP12.55□□□□□ -0.4
SNRPN-208ENST00000577565 XPOTO43592 962 aaKnown RBP12.55□□□□□ -0.4
SNRPN-208ENST00000577565 OPHN1O60890 802 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 PRB1P04280 392 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 CYP17A1P05093 508 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 CKMP06732 381 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 SERPINF2P08697 491 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 USP17L7P0C7H9 530 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 FTH1P19P0C7X4 201 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 TCF3P15923 654 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 GUCY2CP25092 1073 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 HOXD12P35452 270 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 MATR3P43243 847 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNRPN-208ENST00000577565 KIR2DL1P43626 348 aaPredicted RBP12.55□□□□□ -0.4
SNRPN-208ENST00000577565 SLC6A11P48066 632 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 MRPS21P82921 87 aaKnown RBP12.55□□□□□ -0.4
SNRPN-208ENST00000577565 IL17AQ16552 155 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 DUOXA1Q1HG43 343 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 TTC38Q5R3I4 469 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 SLC39A4Q6P5W5 647 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 CENPQQ7L2Z9 268 aaPredicted RBP12.55□□□□□ -0.4
SNRPN-208ENST00000577565 TRMT2BQ96GJ1 504 aaKnown RBP12.55□□□□□ -0.4
SNRPN-208ENST00000577565 SPACA7Q96KW9 195 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 PKMYT1Q99640 499 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 PYM1Q9BRP8 204 aaKnown RBP12.55□□□□□ -0.4
SNRPN-208ENST00000577565 CCSER1Q9C0I3 900 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 DNAAF2Q9NVR5 837 aaKnown RBP12.55□□□□□ -0.4
SNRPN-208ENST00000577565 PCDHB5Q9Y5E4 795 aa12.55□□□□□ -0.4
SNRPN-208ENST00000577565 CEP192Q8TEP8 1941 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 PTPRBP23467 1997 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 MAST4O15021 2626 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 TRAV19A0A0A6YYK7 116 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 OGTO15294 1046 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 MAP3K13O43283 966 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 PRPF40AO75400 957 aaKnown RBP12.54□□□□□ -0.4
SNRPN-208ENST00000577565 C1QL1O75973 258 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 CYP2F1P24903 491 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 TIE1P35590 1138 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 GFPT1Q06210 699 aaPredicted RBP12.54□□□□□ -0.4
SNRPN-208ENST00000577565 SMARCB1Q12824 385 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 ORC2Q13416 577 aaPredicted RBP12.54□□□□□ -0.4
SNRPN-208ENST00000577565 TRIP6Q15654 476 aaKnown RBP12.54□□□□□ -0.4
SNRPN-208ENST00000577565 SPDYCQ5MJ68 293 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 SCARA3Q6AZY7 606 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 SLCO6A1Q86UG4 719 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 SLC41A1Q8IVJ1 513 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 HMGB4Q8WW32 186 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 KCNN1Q92952 543 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 FAM212AQ96EL1 285 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 RPF1Q9H9Y2 349 aaKnown RBP12.54□□□□□ -0.4
SNRPN-208ENST00000577565 SCUBE2Q9NQ36 999 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 CPSF3Q9UKF6 684 aaKnown RBP12.54□□□□□ -0.4
SNRPN-208ENST00000577565 DSEQ9UL01 958 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 ARHGAP26Q9UNA1 814 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 DNM3Q9UQ16 869 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 MYH11P35749 1972 aa12.54□□□□□ -0.4
SNRPN-208ENST00000577565 TCHHQ07283 1943 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 A0A0B4J269 797 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 NPHP3-ACAD11A0A0J9YXS1 232 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 TCRBV21S2A2A0A5A6 115 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 ARHGAP33O14559 1287 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 SCAMP3O14828 347 aaKnown RBP12.53□□□□□ -0.4
SNRPN-208ENST00000577565 HCRTO43612 131 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 ALDH1A2O94788 518 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 NFATC1O95644 943 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 PIGRP01833 764 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 PAX3P23760 479 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 RDXP35241 583 aaKnown RBP12.53□□□□□ -0.4
SNRPN-208ENST00000577565 ATXN3P54252 364 aaPredicted RBP12.53□□□□□ -0.4
SNRPN-208ENST00000577565 NCKAP1LP55160 1127 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 NR1H3Q13133 447 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 TMEM132DQ14C87 1099 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 ERICH6BQ5W0A0 696 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 MARCH9Q86YJ5 346 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 THEM5Q8N1Q8 247 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 GLIS3Q8NEA6 775 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 CCDC26Q8TAB7 109 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 LEO1Q8WVC0 666 aaPredicted RBP12.53□□□□□ -0.4
SNRPN-208ENST00000577565 BICD1Q96G01 975 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 TSPAN18Q96SJ8 248 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 BCCIPQ9P287 314 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNRPN-208ENST00000577565 UXTQ9UBK9 157 aaPredicted RBP12.53□□□□□ -0.4
SNRPN-208ENST00000577565 HCN2Q9UL51 889 aa12.53□□□□□ -0.4
SNRPN-208ENST00000577565 URB1O60287 2271 aaKnown RBP12.53□□□□□ -0.4
SNRPN-208ENST00000577565 TISP43B9A030 160 aa12.52□□□□□ -0.41
SNRPN-208ENST00000577565 CBFA2T3O75081 653 aa12.52□□□□□ -0.41
SNRPN-208ENST00000577565 GABRG2P18507 467 aa12.52□□□□□ -0.41
SNRPN-208ENST00000577565 DPP6P42658 865 aa12.52□□□□□ -0.41
SNRPN-208ENST00000577565 TAF6P49848 677 aa12.52□□□□□ -0.41
SNRPN-208ENST00000577565 LIG4P49917 911 aa12.52□□□□□ -0.41
SNRPN-208ENST00000577565 RPL6Q02878 288 aaKnown RBP12.52□□□□□ -0.41
SNRPN-208ENST00000577565 ZNF33AQ06730 810 aa12.52□□□□□ -0.41
SNRPN-208ENST00000577565 HNRNPDQ14103 355 aaKnown RBP12.52□□□□□ -0.41
SNRPN-208ENST00000577565 TRIM29Q14134 588 aa12.52□□□□□ -0.41
SNRPN-208ENST00000577565 PDIA5Q14554 519 aa12.52□□□□□ -0.41
SNRPN-208ENST00000577565 METTL23Q86XA0 190 aa12.52□□□□□ -0.41
SNRPN-208ENST00000577565 NAXDQ8IW45 347 aa12.52□□□□□ -0.41
SNRPN-208ENST00000577565 DCP1BQ8IZD4 617 aaKnown RBP12.52□□□□□ -0.41
SNRPN-208ENST00000577565 PHTF2Q8N3S3 785 aa12.52□□□□□ -0.41
SNRPN-208ENST00000577565 CEP76Q8TAP6 659 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms