RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 BMP15O95972 392 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 TCF3P15923 654 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 HDCP19113 662 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 ACAT1P24752 427 aaKnown RBP12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 PCSK1P29120 753 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 LHX1P48742 406 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 LMAN2Q12907 356 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 C2orf27AQ580R0 203 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 C4orf50Q6ZRC1 276 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 RASSF3Q86WH2 238 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 SCN4BQ8IWT1 228 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 ARL14EPQ8N8R7 260 aaPredicted RBP12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 USP33Q8TEY7 942 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 LRRC15Q8TF66 581 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 FAM213AQ9BRX8 229 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 EHD2Q9NZN4 543 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 SEL1LQ9UBV2 794 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 ITGA11Q9UKX5 1188 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 MMP17Q9ULZ9 603 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 ARHGAP26Q9UNA1 814 aa12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 R3HCC1Q9Y3T6 440 aaKnown RBP12.49□□□□□ -0.41
CTDNEP1-212ENST00000576613 IGF2RP11717 2491 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 LDHAP00338 332 aaKnown RBP12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 KRT19P08727 400 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 PFKLP17858 780 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 ADSSP30520 456 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 DHPSP49366 369 aaPredicted RBP12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 SEC13P55735 322 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 LMBRD2Q68DH5 695 aaPredicted RBP12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 ZNF720Q7Z2F6 126 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 TTC30AQ86WT1 665 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 SFR1Q86XK3 245 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 BRSK2Q8IWQ3 736 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 ADGRF2Q8IZF7 708 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 CSGALNACT2Q8N6G5 542 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 TOP6BLQ8N6T0 577 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 C1orf127Q8N9H9 656 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 MDGA1Q8NFP4 955 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 SPACA7Q96KW9 195 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 CEP295NLQ96MC4 621 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 PKMYT1Q99640 499 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 MRPL44Q9H9J2 332 aaKnown RBP12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 GDAP2Q9NXN4 497 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 RBAKQ9NYW8 714 aaPredicted RBP12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 GCNT4Q9P109 453 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 EVLQ9UI08 416 aaPredicted RBP12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 WASF3Q9UPY6 502 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 SNX9Q9Y5X1 595 aa12.48□□□□□ -0.41
CTDNEP1-212ENST00000576613 BAHCC1Q9P281 2608 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 ATRXP46100 2492 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 WDFY3Q8IZQ1 3526 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 C2orf78A6NCI8 922 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 MYMKA6NI61 221 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 PATE3B3GLJ2 98 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 K7EQS6 105 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 CDX4O14627 284 aaPredicted RBP12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 SPINK2P20155 84 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 BCKDHBP21953 392 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 DDIT3P35638 169 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 OPRD1P41143 372 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 DPP6P42658 865 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 MAGEA11P43364 429 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 MRPS21P82921 87 aaKnown RBP12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 MYO1EQ12965 1108 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 MAPRE1Q15691 268 aaKnown RBP12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 CRY1Q16526 586 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 UAP1L1Q3KQV9 507 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 VSTM1Q6UX27 236 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 LPCAT2Q7L5N7 544 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 KIAA1958Q8N8K9 716 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 PIGKQ92643 395 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 SAAL1Q96ER3 474 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 SPATA17Q96L03 361 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 ACCSQ96QU6 501 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 KIF2CQ99661 725 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 SCNM1Q9BWG6 230 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 NUSAP1Q9BXS6 441 aaKnown RBP12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 IKZF4Q9H2S9 585 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 LINC00597Q9H2U6 94 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 SLC32A1Q9H598 525 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 PPP4R2Q9NY27 417 aa12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 CIZ1Q9ULV3 898 aaPredicted RBP12.47□□□□□ -0.41
CTDNEP1-212ENST00000576613 ABCA7Q8IZY2 2146 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 AKAP13Q12802 2813 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 SLC9A3R1O14745 358 aaPredicted RBP12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 TNFRSF10BO14763 440 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 GABRDO14764 452 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 MAP3K13O43283 966 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 PPP1R37O75864 691 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 TMEM191BP0C7N4 346 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 GAP43P17677 238 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 GARTP22102 1010 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 ANXA13P27216 316 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 GJB2P29033 226 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 IRX4P78413 519 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 RBP5P82980 135 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 BYSLQ13895 437 aaKnown RBP12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 HSF5Q4G112 596 aaPredicted RBP12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 TRIM61Q5EBN2 209 aa12.46□□□□□ -0.41
CTDNEP1-212ENST00000576613 L1TD1Q5T7N2 865 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms