RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 CADM1Q9BY67 442 aaKnown RBP6.56□□□□□ -1.36
PTPN9-204ENST00000564970 PAIP1Q9H074 479 aaKnown RBP6.56□□□□□ -1.36
PTPN9-204ENST00000564970 NT5C3AQ9H0P0 336 aa6.56□□□□□ -1.36
PTPN9-204ENST00000564970 CYP4F11Q9HBI6 524 aa6.56□□□□□ -1.36
PTPN9-204ENST00000564970 HMG20AQ9NP66 347 aa6.56□□□□□ -1.36
PTPN9-204ENST00000564970 WASH6PQ9NQA3 447 aa6.56□□□□□ -1.36
PTPN9-204ENST00000564970 MAN1C1Q9NR34 630 aa6.56□□□□□ -1.36
PTPN9-204ENST00000564970 POLE3Q9NRF9 147 aa6.56□□□□□ -1.36
PTPN9-204ENST00000564970 MBIPQ9NS73 344 aa6.56□□□□□ -1.36
PTPN9-204ENST00000564970 GPRC5DQ9NZD1 345 aa6.56□□□□□ -1.36
PTPN9-204ENST00000564970 ZC3H7BQ9UGR2 993 aaKnown RBP6.56□□□□□ -1.36
PTPN9-204ENST00000564970 LGALS13Q9UHV8 139 aa6.56□□□□□ -1.36
PTPN9-204ENST00000564970 HAO1Q9UJM8 370 aa6.56□□□□□ -1.36
PTPN9-204ENST00000564970 ARHGAP26Q9UNA1 814 aa6.56□□□□□ -1.36
PTPN9-204ENST00000564970 CHKBQ9Y259 395 aa6.56□□□□□ -1.36
PTPN9-204ENST00000564970 AP3M1Q9Y2T2 418 aa6.56□□□□□ -1.36
PTPN9-204ENST00000564970 MTO1Q9Y2Z2 717 aaKnown RBP6.56□□□□□ -1.36
PTPN9-204ENST00000564970 SLC4A4Q9Y6R1 1079 aa6.56□□□□□ -1.36
PTPN9-204ENST00000564970 ZHX2Q9Y6X8 837 aa6.56□□□□□ -1.36
PTPN9-204ENST00000564970 RTL9Q8NET4 1388 aa6.56□□□□□ -1.36
PTPN9-204ENST00000564970 EP400Q96L91 3159 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 NHSL1Q5SYE7 1610 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 A0A0U1RQJ8 604 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 TTC26A0AVF1 554 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 FAM170AA1A519 330 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 SMCO2A6NFE2 343 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 KCNJ18B7U540 433 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 PI4K2BG5E9Z4 385 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 ASNA1O43681 348 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 GATCO43716 136 aaKnown RBP6.55□□□□□ -1.36
PTPN9-204ENST00000564970 GAS2O43903 313 aaKnown RBP6.55□□□□□ -1.36
PTPN9-204ENST00000564970 EXOC3O60645 756 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 COBLO75128 1261 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 SERPINI2O75830 405 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 KRT37O76014 449 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 TM7SF2O76062 418 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 DDHD2O94830 711 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 SNAPINO95295 136 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 WDPCPO95876 746 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 RETP07949 1114 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 T-ENOLP0DO92 83 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 DLATP10515 647 aaKnown RBP6.55□□□□□ -1.36
PTPN9-204ENST00000564970 RARBP10826 455 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 NCAM1P13591 858 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 IMPDH1P20839 514 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 BMP6P22004 513 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 ACAT1P24752 427 aaKnown RBP6.55□□□□□ -1.36
PTPN9-204ENST00000564970 CXCR2P25025 360 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 TARSP26639 723 aaKnown RBP6.55□□□□□ -1.36
PTPN9-204ENST00000564970 LRPAP1P30533 357 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 HOXC13P31276 330 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 EVI2BP34910 448 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 PGM1P36871 562 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 TALDO1P37837 337 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 MAGEA11P43364 429 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 NEK3P51956 506 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 AP1S2P56377 157 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 VBP1P61758 197 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 IGBP1P78318 339 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 CAP1Q01518 475 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 PTH1RQ03431 593 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 ZNF33BQ06732 778 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 KLHL30Q0D2K2 578 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 PAK1Q13153 545 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 TRPC3Q13507 836 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 KCNJ12Q14500 433 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 SPARCL1Q14515 664 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 PTPAQ15257 358 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 ALX1Q15699 326 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 ZBED5Q49AG3 693 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 ANKRD39Q53RE8 183 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 TDRD12Q587J7 1177 aaKnown RBP6.55□□□□□ -1.36
PTPN9-204ENST00000564970 WDR44Q5JSH3 913 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 RARS2Q5T160 578 aaKnown RBP6.55□□□□□ -1.36
PTPN9-204ENST00000564970 KLHDC7AQ5VTJ3 777 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 FAM117BQ6P1L5 589 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 ZFP1Q6P2D0 407 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 NFRKBQ6P4R8 1299 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 ELMSAN1Q6PJG2 1045 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 WDR59Q6PJI9 974 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 SHC4Q6S5L8 630 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 MPRIPQ6WCQ1 1025 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 RHOUQ7L0Q8 258 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 EEPD1Q7L9B9 569 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 LRRTM3Q86VH5 581 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 STX12Q86Y82 276 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 LACC1Q8IV20 430 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 UNC5CLQ8IV45 518 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 CDH26Q8IXH8 852 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 KBTBD2Q8IY47 623 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 DIS3L2Q8IYB7 885 aaKnown RBP6.55□□□□□ -1.36
PTPN9-204ENST00000564970 SLC38A6Q8IZM9 456 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 SYCE1Q8N0S2 351 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 TCAIMQ8N3R3 496 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 RASGEF1CQ8N431 466 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 ABTB2Q8N961 1025 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 ADCY4Q8NFM4 1077 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 RAB3IL1Q8TBN0 382 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 SLC22A8Q8TCC7 542 aa6.55□□□□□ -1.36
PTPN9-204ENST00000564970 RHPN1Q8TCX5 695 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms