RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 GRHL1Q9NZI5 618 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 BFARQ9NZS9 450 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 BCL9O00512 1426 aa13.14□□□□□ -0.31
COMMD4-209ENST00000564068 TBC1D12O60347 775 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 ATRNO75882 1429 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 TPBGLP0DKB5 382 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 VCPP55072 806 aaKnown RBP13.13□□□□□ -0.31
COMMD4-209ENST00000564068 SOX10P56693 466 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 TAP1Q03518 808 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 SLC1A5Q15758 541 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 FASTKD1Q53R41 847 aaKnown RBP13.13□□□□□ -0.31
COMMD4-209ENST00000564068 IFNEQ86WN2 208 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 CYP4X1Q8N118 509 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 PGBD4Q96DM1 585 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 TBC1D23Q9NUY8 699 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 SHOC2Q9UQ13 582 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 R3HDM2Q9Y2K5 976 aaKnown RBP13.13□□□□□ -0.31
COMMD4-209ENST00000564068 PEAK1Q9H792 1746 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 APOL1O14791 398 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 SPAG6O75602 509 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 USP1O94782 785 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 PCYT1AP49585 367 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 TMED10P49755 219 aaKnown RBP13.13□□□□□ -0.31
COMMD4-209ENST00000564068 MAPK6Q16659 721 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 ZDHHC24Q6UX98 284 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 PRPF18Q99633 342 aaKnown RBP13.13□□□□□ -0.31
COMMD4-209ENST00000564068 SIKE1Q9BRV8 207 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 NKX1-2Q9UD57 310 aaPredicted RBP13.13□□□□□ -0.31
COMMD4-209ENST00000564068 HERC5Q9UII4 1024 aaKnown RBP13.13□□□□□ -0.31
COMMD4-209ENST00000564068 CHKBQ9Y259 395 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 MON2Q7Z3U7 1717 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 OCA2Q04671 838 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 MOXD1Q6UVY6 613 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 C4orf50Q6ZRC1 276 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 RIPOR1Q6ZS17 1223 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 ZNF677Q86XU0 584 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 FAM81AQ8TBF8 368 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 PAK5Q9P286 719 aa13.13□□□□□ -0.31
COMMD4-209ENST00000564068 POLRMTO00411 1230 aaKnown RBP13.12□□□□□ -0.31
COMMD4-209ENST00000564068 LIN7AO14910 233 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-209ENST00000564068 GSC2O15499 205 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 RAG1P15918 1043 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 SFNP31947 248 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 PPIDQ08752 370 aaKnown RBP13.12□□□□□ -0.31
COMMD4-209ENST00000564068 ORC1Q13415 861 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 CUL2Q13617 745 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 ZNF568Q3ZCX4 644 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 KCTD21Q4G0X4 260 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 OR6B3Q8NGW1 331 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 EZH1Q92800 747 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-209ENST00000564068 CDHR1Q96JP9 859 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 MXRA8Q9BRK3 442 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 GRIP2Q9C0E4 1043 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 MTFR1LQ9H019 292 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 ZDHHC18Q9NUE0 388 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.12□□□□□ -0.313e-10■■■■■ 33.7
COMMD4-209ENST00000564068 ACTL7BQ9Y614 415 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 PIK3C2AO00443 1686 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 KBTBD13C9JR72 458 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 C2CD2LO14523 706 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 FSCN2O14926 492 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 TMCC1O94876 653 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 MARSP56192 900 aaKnown RBP13.12□□□□□ -0.31
COMMD4-209ENST00000564068 RPS6P62753 249 aaKnown RBP13.12□□□□□ -0.31
COMMD4-209ENST00000564068 PPP1R15BQ5SWA1 713 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 DSTYKQ6XUX3 929 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 CPNE8Q86YQ8 564 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 RFWD2Q8NHY2 731 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 LRRC15Q8TF66 581 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 GFM2Q969S9 779 aaKnown RBP13.12□□□□□ -0.31
COMMD4-209ENST00000564068 PCDH9Q9HC56 1237 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 KRT82Q9NSB4 513 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 MAP4P27816 1152 aaKnown RBP13.12□□□□□ -0.31
COMMD4-209ENST00000564068 TPP2P29144 1249 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-209ENST00000564068 FOXN2P32314 431 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 TBL3Q12788 808 aaKnown RBP13.12□□□□□ -0.31
COMMD4-209ENST00000564068 KBTBD12Q3ZCT8 623 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 CLPTM1LQ96KA5 538 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 TRAPPC9Q96Q05 1148 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 PCDHB18PQ96TA0 734 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 RIT2Q99578 217 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 TMEM59LQ9UK28 342 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 ANPEPP15144 967 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 KCNA4P22459 653 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 NPTX2P47972 431 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 SERPINB9P50453 376 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 GPC3P51654 580 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 FAM160B1Q5W0V3 765 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 PODNQ7Z5L7 613 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 ALYREFQ86V81 257 aaKnown RBP13.12□□□□□ -0.31
COMMD4-209ENST00000564068 AJAP1Q9UKB5 411 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-209ENST00000564068 NUB1Q9Y5A7 615 aa13.12□□□□□ -0.31
COMMD4-209ENST00000564068 F8VP50 259 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 GYS1P13807 737 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 HDAC4P56524 1084 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 MARK2Q7KZI7 788 aaKnown RBP13.11□□□□□ -0.31
COMMD4-209ENST00000564068 CDKL3Q8IVW4 592 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-209ENST00000564068 USP13Q92995 863 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-209ENST00000564068 AGBL1Q96MI9 1066 aa13.11□□□□□ -0.31
COMMD4-209ENST00000564068 DCUN1D5Q9BTE7 237 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms