RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 TFAP2BQ92481 460 aa13□□□□□ -0.33
USP8-209ENST00000560297 SPATA17Q96L03 361 aa13□□□□□ -0.33
USP8-209ENST00000560297 C8orf48Q96LL4 319 aa13□□□□□ -0.33
USP8-209ENST00000560297 SEPT5Q99719 369 aaPredicted RBP13□□□□□ -0.33
USP8-209ENST00000560297 DUSP16Q9BY84 665 aa13□□□□□ -0.33
USP8-209ENST00000560297 UBXN6Q9BZV1 441 aa13□□□□□ -0.33
USP8-209ENST00000560297 ZNF518BQ9C0D4 1074 aa13□□□□□ -0.33
USP8-209ENST00000560297 CSNK1G1Q9HCP0 422 aa13□□□□□ -0.33
USP8-209ENST00000560297 CLDND1Q9NY35 253 aa13□□□□□ -0.33
USP8-209ENST00000560297 ASB3Q9Y575 518 aa13□□□□□ -0.33
USP8-209ENST00000560297 INSL5Q9Y5Q6 135 aa13□□□□□ -0.33
USP8-209ENST00000560297 PRRC2BQ5JSZ5 2229 aaKnown RBP13□□□□□ -0.33
USP8-209ENST00000560297 LRRC53A6NM62 1247 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 XYLBO75191 536 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 AP1G2O75843 785 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 PAPLNO95428 1278 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 GLP2RO95838 553 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 POU2F2P09086 479 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 PNMA6AP0CW24 399 aaPredicted RBP12.99□□□□□ -0.33
USP8-209ENST00000560297 BRD2P25440 801 aaKnown RBP12.99□□□□□ -0.33
USP8-209ENST00000560297 ANXA13P27216 316 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 CASP14P31944 242 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 PDE6CP51160 858 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 BCAT1P54687 386 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 TBX2Q13207 712 aaPredicted RBP12.99□□□□□ -0.33
USP8-209ENST00000560297 VEPH1Q14D04 833 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 CCDC85BQ15834 202 aaPredicted RBP12.99□□□□□ -0.33
USP8-209ENST00000560297 CCDC142Q17RM4 750 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 ANKRD54Q6NXT1 300 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 IRF2BP2Q7Z5L9 587 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.99□□□□□ -0.33
USP8-209ENST00000560297 ITIH5Q86UX2 942 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 SCN4BQ8IWT1 228 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 DRC7Q8IY82 874 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 ELMOD1Q8N336 334 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 OR8K1Q8NGG5 319 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 ZNF512Q96ME7 567 aaPredicted RBP12.99□□□□□ -0.33
USP8-209ENST00000560297 RHOBTB2Q9BYZ6 727 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 PRKD2Q9BZL6 878 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 CRISPLD1Q9H336 500 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 SFXN1Q9H9B4 322 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 PNPLA8Q9NP80 782 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 DMAP1Q9NPF5 467 aaPredicted RBP12.99□□□□□ -0.33
USP8-209ENST00000560297 KRT82Q9NSB4 513 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 EHD2Q9NZN4 543 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 TSPAN16Q9UKR8 245 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.99□□□□□ -0.33
USP8-209ENST00000560297 YIPF1Q9Y548 306 aa12.99□□□□□ -0.33
USP8-209ENST00000560297 BZW2Q9Y6E2 419 aaKnown RBP12.99□□□□□ -0.33
USP8-209ENST00000560297 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.98□□□□□ -0.33
USP8-209ENST00000560297 CCDC195A0A1B0GUA6 201 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 AKR1B15C9JRZ8 316 aaPredicted RBP12.98□□□□□ -0.33
USP8-209ENST00000560297 LINC01565O15544 149 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 MICAL2O94851 1124 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 SETSIPP0DME0 302 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 NPR3P17342 541 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 CDR1P51861 262 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 ARID5AQ03989 594 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 ITIH3Q06033 890 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 BST2Q10589 180 aaKnown RBP12.98□□□□□ -0.33
USP8-209ENST00000560297 TWF1Q12792 350 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 SKIV2LQ15477 1246 aaKnown RBP12.98□□□□□ -0.33
USP8-209ENST00000560297 ASIC2Q16515 512 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 DDR2Q16832 855 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 GOLGA7BQ2TAP0 167 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 PKDCCQ504Y2 493 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 EP400NLQ6ZTU2 488 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 CNGA4Q8IV77 575 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 TTC9BQ8N6N2 239 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 EPS8L1Q8TE68 723 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 PPM1EQ8WY54 764 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 ANP32BQ92688 251 aaKnown RBP12.98□□□□□ -0.33
USP8-209ENST00000560297 HLA-CQ95604 372 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 SMOQ99835 787 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 ZSWIM1Q9BR11 485 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 LHX5Q9H2C1 402 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 PDCL3Q9H2J4 239 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 ACP6Q9NPH0 428 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 ZNHIT6Q9NWK9 470 aaKnown RBP12.98□□□□□ -0.33
USP8-209ENST00000560297 IMPACTQ9P2X3 320 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 PCDHGC3Q9UN70 934 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 COG5Q9UP83 839 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 CEP83Q9Y592 693 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 TRANK1O15050 2925 aa12.98□□□□□ -0.33
USP8-209ENST00000560297 COL4A4P53420 1690 aaPredicted RBP12.97□□□□□ -0.33
USP8-209ENST00000560297 GOLGA6L6A8MZA4 724 aa12.97□□□□□ -0.33
USP8-209ENST00000560297 F8VP50 259 aa12.97□□□□□ -0.33
USP8-209ENST00000560297 RFPL2O75678 378 aa12.97□□□□□ -0.33
USP8-209ENST00000560297 CSH1P0DML2 217 aa12.97□□□□□ -0.33
USP8-209ENST00000560297 CSH2P0DML3 217 aa12.97□□□□□ -0.33
USP8-209ENST00000560297 HNRNPH3P31942 346 aaKnown RBP12.97□□□□□ -0.33
USP8-209ENST00000560297 LTBRP36941 435 aa12.97□□□□□ -0.33
USP8-209ENST00000560297 PRKCIP41743 596 aa12.97□□□□□ -0.33
USP8-209ENST00000560297 MAP3K7CLP57077 242 aa12.97□□□□□ -0.33
USP8-209ENST00000560297 RBM10P98175 930 aaKnown RBP12.97□□□□□ -0.33
USP8-209ENST00000560297 CDR2Q01850 454 aa12.97□□□□□ -0.33
USP8-209ENST00000560297 KLHL30Q0D2K2 578 aa12.97□□□□□ -0.33
USP8-209ENST00000560297 ARID5BQ14865 1188 aa12.97□□□□□ -0.33
USP8-209ENST00000560297 TAF12Q16514 161 aa12.97□□□□□ -0.33
USP8-209ENST00000560297 CES5AQ6NT32 575 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms