RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 GLIS3Q8NEA6 775 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 OSCP1Q8WVF1 389 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 TCEAL3Q969E4 200 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 HHIPQ96QV1 700 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 P2RY13Q9BPV8 354 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 LSM14BQ9BX40 385 aaKnown RBP11.91□□□□□ -0.5
HERC1-204ENST00000559715 PDE11AQ9HCR9 933 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 CRTAC1Q9NQ79 661 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 TMEM30AQ9NV96 361 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 TBC1D7Q9P0N9 293 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 SEL1LQ9UBV2 794 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 STK17AQ9UEE5 414 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 MAGED2Q9UNF1 606 aaPredicted RBP11.91□□□□□ -0.5
HERC1-204ENST00000559715 SRPRBQ9Y5M8 271 aaKnown RBP11.91□□□□□ -0.5
HERC1-204ENST00000559715 WNT6Q9Y6F9 365 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 CEP192Q8TEP8 1941 aa11.91□□□□□ -0.5
HERC1-204ENST00000559715 GOLGA8IPA6NC78 632 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 GOLGA8JA6NMD2 632 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 K7EQS6 105 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 ATG13O75143 517 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 BMP15O95972 392 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 HNRNPLP14866 589 aaKnown RBP eCLIP11.9□□□□□ -0.5
HERC1-204ENST00000559715 GARTP22102 1010 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 OPRD1P41143 372 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 PNPLA4P41247 253 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 TFAMQ00059 246 aaKnown RBP11.9□□□□□ -0.5
HERC1-204ENST00000559715 BFSP1Q12934 665 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 CUL4AQ13619 759 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 ST3GAL2Q16842 350 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 SFTPA1Q8IWL2 248 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 TMEM86AQ8N2M4 240 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 ARL14EPQ8N8R7 260 aaPredicted RBP11.9□□□□□ -0.5
HERC1-204ENST00000559715 KRI1Q8N9T8 703 aaKnown RBP11.9□□□□□ -0.5
HERC1-204ENST00000559715 OR5B17Q8NGF7 314 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 RPLP0P6Q8NHW5 317 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 MRPS31Q92665 395 aaKnown RBP11.9□□□□□ -0.5
HERC1-204ENST00000559715 ZNF560Q96MR9 790 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 GCNAQ96QF7 691 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 GZF1Q9H116 711 aaPredicted RBP11.9□□□□□ -0.5
HERC1-204ENST00000559715 TMEM206Q9H813 350 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 MRPL44Q9H9J2 332 aaKnown RBP11.9□□□□□ -0.5
HERC1-204ENST00000559715 SMC3Q9UQE7 1217 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 PCDHGA5Q9Y5G8 931 aa11.9□□□□□ -0.5
HERC1-204ENST00000559715 SMG1Q96Q15 3661 aaKnown RBP11.9□□□□□ -0.51
HERC1-204ENST00000559715 MPLP40238 635 aa11.89□□□□□ -0.51
HERC1-204ENST00000559715 MAGEA11P43364 429 aa11.89□□□□□ -0.51
HERC1-204ENST00000559715 RPL10AP62906 217 aaKnown RBP11.89□□□□□ -0.51
HERC1-204ENST00000559715 TSPY1Q01534 308 aa11.89□□□□□ -0.51
HERC1-204ENST00000559715 RESTQ13127 1097 aa11.89□□□□□ -0.51
HERC1-204ENST00000559715 TAF12Q16514 161 aa11.89□□□□□ -0.51
HERC1-204ENST00000559715 RASSF3Q86WH2 238 aa11.89□□□□□ -0.51
HERC1-204ENST00000559715 CSGALNACT2Q8N6G5 542 aa11.89□□□□□ -0.51
HERC1-204ENST00000559715 TOP6BLQ8N6T0 577 aa11.89□□□□□ -0.51
HERC1-204ENST00000559715 SPATA18Q8TC71 538 aa11.89□□□□□ -0.51
HERC1-204ENST00000559715 FUBP3Q96I24 572 aaKnown RBP eCLIP11.89□□□□□ -0.51
HERC1-204ENST00000559715 ACCSQ96QU6 501 aa11.89□□□□□ -0.51
HERC1-204ENST00000559715 MTMR12Q9C0I1 747 aa11.89□□□□□ -0.51
HERC1-204ENST00000559715 RNF38Q9H0F5 515 aa11.89□□□□□ -0.51
HERC1-204ENST00000559715 INTS13Q9NVM9 706 aa11.89□□□□□ -0.51
HERC1-204ENST00000559715 DUS2Q9NX74 493 aaKnown RBP11.89□□□□□ -0.51
HERC1-204ENST00000559715 RBAKQ9NYW8 714 aaPredicted RBP11.89□□□□□ -0.51
HERC1-204ENST00000559715 ITGA11Q9UKX5 1188 aa11.89□□□□□ -0.51
HERC1-204ENST00000559715 ARHGAP26Q9UNA1 814 aa11.89□□□□□ -0.51
HERC1-204ENST00000559715 SLC8A2Q9UPR5 921 aa11.89□□□□□ -0.51
HERC1-204ENST00000559715 SNX9Q9Y5X1 595 aa11.89□□□□□ -0.51
HERC1-204ENST00000559715 MORC2Q9Y6X9 1032 aaPredicted RBP11.89□□□□□ -0.51
HERC1-204ENST00000559715 FASNP49327 2511 aaKnown RBP11.88□□□□□ -0.51
HERC1-204ENST00000559715 BCLAF3A2AJT9 711 aaKnown RBP11.88□□□□□ -0.51
HERC1-204ENST00000559715 HUS1O60921 280 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 PRPF6O94906 941 aaKnown RBP11.88□□□□□ -0.51
HERC1-204ENST00000559715 KCNK5O95279 499 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 OLFM2O95897 454 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 USP17L7P0C7H9 530 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 GAP43P17677 238 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 CACNA2D1P54289 1103 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 DMC1Q14565 340 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 FBXO43Q4G163 708 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 AASDHQ4L235 1098 aaPredicted RBP11.88□□□□□ -0.51
HERC1-204ENST00000559715 LMBRD2Q68DH5 695 aaPredicted RBP11.88□□□□□ -0.51
HERC1-204ENST00000559715 DPH6Q7L8W6 267 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 ADGRF2Q8IZF7 708 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 SH3RF2Q8TEC5 729 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 USP33Q8TEY7 942 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 DDX1Q92499 740 aaKnown RBP11.88□□□□□ -0.51
HERC1-204ENST00000559715 CD101Q93033 1021 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 HPS3Q969F9 1004 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 SPATA17Q96L03 361 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 TTLL2Q9BWV7 592 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 PCIF1Q9H4Z3 704 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 VPS45Q9NRW7 570 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 UXTQ9UBK9 157 aaPredicted RBP11.88□□□□□ -0.51
HERC1-204ENST00000559715 IGSF10Q6WRI0 2623 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 ADAMTS9Q9P2N4 1935 aa11.88□□□□□ -0.51
HERC1-204ENST00000559715 A0A0A0MRY4 1105 aa11.87□□□□□ -0.51
HERC1-204ENST00000559715 TRAV19A0A0A6YYK7 116 aa11.87□□□□□ -0.51
HERC1-204ENST00000559715 LNP1A1A4G5 178 aa11.87□□□□□ -0.51
HERC1-204ENST00000559715 CDX4O14627 284 aaPredicted RBP11.87□□□□□ -0.51
HERC1-204ENST00000559715 GIPC1O14908 333 aa11.87□□□□□ -0.51
HERC1-204ENST00000559715 GCNT3O95395 438 aa11.87□□□□□ -0.51
HERC1-204ENST00000559715 APBB3O95704 486 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms