RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 TSPAN16Q9UKR8 245 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 NENFQ9UMX5 172 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 TNFRSF10BO14763 440 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 CLSTN1O94985 981 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 GLUD1P00367 558 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 EPCAMP16422 314 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 BRD2P25440 801 aaKnown RBP15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 GPD2P43304 727 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 NRIP1P48552 1158 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 FMO1Q01740 532 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 CDR2Q01850 454 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 ADCY1Q08828 1119 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 ASTE1Q2TB18 679 aaPredicted RBP15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 TJAP1Q5JTD0 557 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 SFMBT2Q5VUG0 894 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 PALB2Q86YC2 1186 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 WDTC1Q8N5D0 677 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 KREMEN2Q8NCW0 462 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 ZNF397Q8NF99 534 aaPredicted RBP15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 SLC30A5Q8TAD4 765 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 SLC35F5Q8WV83 523 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 C8orf48Q96LL4 319 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 DUSP16Q9BY84 665 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 DNAI2Q9GZS0 605 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 TLE6Q9H808 572 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 FAM49BQ9NUQ9 324 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 ARHGAP20Q9P2F6 1191 aa15.7■□□□□ 0.1
SNRPA1-207ENST00000559309 FAM92AA1XBS5 289 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 AKR1B15C9JRZ8 316 aaPredicted RBP15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 CLDN5O00501 218 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 PER2O15055 1255 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 BEST1O76090 585 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 MICAL2O94851 1124 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 CYP1A1P04798 512 aaPredicted RBP15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 ATF6P18850 670 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 CYP2F1P24903 491 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 GTF2F1P35269 517 aaKnown RBP eCLIP15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 ADKP55263 362 aaKnown RBP15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 DUSP4Q13115 394 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 RAB41Q5JT25 222 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 TMEM139Q8IV31 216 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 GLYCTKQ8IVS8 523 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 CMASQ8NFW8 434 aaPredicted RBP15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 STK32AQ8WU08 396 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 SLC20A1Q8WUM9 679 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 CPLX3Q8WVH0 158 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 SMARCD1Q96GM5 515 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 SPATA17Q96L03 361 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 PGLYRP2Q96PD5 576 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 PANX2Q96RD6 677 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 CYTH4Q9UIA0 394 aa15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 BZW2Q9Y6E2 419 aaKnown RBP15.69■□□□□ 0.1
SNRPA1-207ENST00000559309 ZMYND10O75800 440 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 GABBR2O75899 941 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 SERPING1P05155 500 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 CCDC172P0C7W6 258 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 UNGP13051 313 aaPredicted RBP15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 NPR3P17342 541 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 BDNFP23560 247 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 LTBRP36941 435 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 USP8P40818 1118 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 PLA2G4AP47712 749 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 TUFMP49411 452 aaKnown RBP15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 PDE6CP51160 858 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 BCAT1P54687 386 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 ARPP19P56211 112 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 RBM10P98175 930 aaKnown RBP15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 GOLGA8FQ08AF8 430 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 GOLGA8DPQ0D2H9 430 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 ZNF571Q7Z3V5 609 aaPredicted RBP15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 SPATA2LQ8IUW3 424 aaPredicted RBP15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 KCTD13Q8WZ19 329 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 PPP2R3CQ969Q6 453 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 ZNF707Q96C28 371 aaPredicted RBP15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 PCDHB18PQ96TA0 734 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 GAS2L1Q99501 681 aaPredicted RBP15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 LRRC3Q9BY71 257 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 HAUS4Q9H6D7 363 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 YIPF1Q9Y548 306 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 INSL5Q9Y5Q6 135 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 XIRP2A4UGR9 3374 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 NOTCH4Q99466 2003 aa15.68■□□□□ 0.1
SNRPA1-207ENST00000559309 ZNF638Q14966 1978 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 SSU72P8A0A1W2PR75 194 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 TULP2O00295 520 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 XPO1O14980 1071 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 THAP12O43422 761 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 MED7O43513 233 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 NCK2O43639 380 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 LSM8O95777 96 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 MMEP08473 750 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 FAM200BP0CF97 657 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 SETSIPP0DME0 302 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 CD19P15391 556 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 ANXA13P27216 316 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 NOMO3P69849 1222 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 CYP27A1Q02318 531 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 PDE4CQ08493 712 aa15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 BST2Q10589 180 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-207ENST00000559309 ASIC2Q16515 512 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms