RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 SPATA2LQ8IUW3 424 aaPredicted RBP11.05□□□□□ -0.64
PSMA4-207ENST00000558635 TTC9BQ8N6N2 239 aa11.05□□□□□ -0.64
PSMA4-207ENST00000558635 C12orf29Q8N999 325 aa11.05□□□□□ -0.64
PSMA4-207ENST00000558635 SLC4A11Q8NBS3 891 aa11.05□□□□□ -0.64
PSMA4-207ENST00000558635 SPPL2BQ8TCT7 592 aa11.05□□□□□ -0.64
PSMA4-207ENST00000558635 C2orf15Q8WU43 125 aaKnown RBP11.05□□□□□ -0.64
PSMA4-207ENST00000558635 JAKMIP2Q96AA8 810 aa11.05□□□□□ -0.64
PSMA4-207ENST00000558635 PCED1BQ96HM7 432 aa11.05□□□□□ -0.64
PSMA4-207ENST00000558635 TMEM176AQ96HP8 235 aa11.05□□□□□ -0.64
PSMA4-207ENST00000558635 MSLNLQ96KJ4 702 aa11.05□□□□□ -0.64
PSMA4-207ENST00000558635 FAM81BQ96LP2 452 aa11.05□□□□□ -0.64
PSMA4-207ENST00000558635 HEXIM2Q96MH2 286 aaKnown RBP11.05□□□□□ -0.64
PSMA4-207ENST00000558635 PRR14Q9BWN1 585 aa11.05□□□□□ -0.64
PSMA4-207ENST00000558635 APOL5Q9BWW9 433 aa11.05□□□□□ -0.64
PSMA4-207ENST00000558635 B3GNT5Q9BYG0 378 aa11.05□□□□□ -0.64
PSMA4-207ENST00000558635 RHOBTB2Q9BYZ6 727 aa11.05□□□□□ -0.64
PSMA4-207ENST00000558635 GANQ9H2C0 597 aa11.05□□□□□ -0.64
PSMA4-207ENST00000558635 PLCB1Q9NQ66 1216 aa11.05□□□□□ -0.64
PSMA4-207ENST00000558635 FAM207AQ9NSI2 230 aaPredicted RBP11.05□□□□□ -0.64
PSMA4-207ENST00000558635 IFNKQ9P0W0 207 aa11.05□□□□□ -0.64
PSMA4-207ENST00000558635 FHOD1Q9Y613 1164 aa11.05□□□□□ -0.64
PSMA4-207ENST00000558635 CCDC195A0A1B0GUA6 201 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 H3BQ06 376 aaPredicted RBP11.04□□□□□ -0.64
PSMA4-207ENST00000558635 CLDN5O00501 218 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 EPHB6O15197 1021 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 SOAT2O75908 522 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 NOL4O94818 638 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 HAPLN1P10915 354 aaPredicted RBP11.04□□□□□ -0.64
PSMA4-207ENST00000558635 KRT5P13647 590 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 CCDC130P13994 396 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 UCHL3P15374 230 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 HOXB8P17481 243 aaPredicted RBP11.04□□□□□ -0.64
PSMA4-207ENST00000558635 TRIM21P19474 475 aaKnown RBP11.04□□□□□ -0.64
PSMA4-207ENST00000558635 BDNFP23560 247 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 CYP2F1P24903 491 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 RAPGEF1Q13905 1077 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 MGAT5BQ3V5L5 792 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 PPM1LQ5SGD2 360 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 TMC5Q6UXY8 1006 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 PAQR9Q6ZVX9 377 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 RBBP8NLQ8NC74 664 aaPredicted RBP11.04□□□□□ -0.64
PSMA4-207ENST00000558635 NEK11Q8NG66 645 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 FEZF2Q8TBJ5 459 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 SHC3Q92529 594 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 FUBP3Q96I24 572 aaKnown RBP eCLIP11.04□□□□□ -0.64
PSMA4-207ENST00000558635 SEPT5Q99719 369 aaPredicted RBP11.04□□□□□ -0.64
PSMA4-207ENST00000558635 MED10Q9BTT4 135 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 NAA15Q9BXJ9 866 aaKnown RBP11.04□□□□□ -0.64
PSMA4-207ENST00000558635 ZNF518BQ9C0D4 1074 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 DNAI2Q9GZS0 605 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 S1PR5Q9H228 398 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 SFXN1Q9H9B4 322 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 ABCB6Q9NP58 842 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 FAM49BQ9NUQ9 324 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 ZDHHC7Q9NXF8 308 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 HSFX1Q9UBD0 423 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 COG5Q9UP83 839 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 CNTN6Q9UQ52 1028 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 YIPF1Q9Y548 306 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 INSL5Q9Y5Q6 135 aa11.04□□□□□ -0.64
PSMA4-207ENST00000558635 A0A1W2PQC6 194 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 FOXN3O00409 490 aaPredicted RBP11.03□□□□□ -0.64
PSMA4-207ENST00000558635 GPR37O15354 613 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 CCL16O15467 120 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 CALCAP01258 141 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 LRG1P02750 347 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 HNRNPA1P09651 372 aaKnown RBP eCLIP11.03□□□□□ -0.64
PSMA4-207ENST00000558635 CD19P15391 556 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 FECHP22830 423 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 ADORA2BP29275 332 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 HOXA9P31269 272 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 USP8P40818 1118 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 ALDH1A3P47895 512 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 TUFMP49411 452 aaKnown RBP11.03□□□□□ -0.64
PSMA4-207ENST00000558635 ZNF132P52740 706 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 POLR2FP61218 127 aaKnown RBP11.03□□□□□ -0.64
PSMA4-207ENST00000558635 TWF1Q12792 350 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 DRAP1Q14919 205 aaPredicted RBP11.03□□□□□ -0.64
PSMA4-207ENST00000558635 CFAP221Q4G0U5 840 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 RTL10Q7L3V2 364 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 GPIHBP1Q8IV16 184 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 SCN4BQ8IWT1 228 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 FUKQ8N0W3 1084 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 CMASQ8NFW8 434 aaPredicted RBP11.03□□□□□ -0.64
PSMA4-207ENST00000558635 SLC2A14Q8TDB8 520 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 ZNF707Q96C28 371 aaPredicted RBP11.03□□□□□ -0.64
PSMA4-207ENST00000558635 CYFIP2Q96F07 1278 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 HNRNPABQ99729 332 aaKnown RBP11.03□□□□□ -0.64
PSMA4-207ENST00000558635 STK33Q9BYT3 514 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 PRKD2Q9BZL6 878 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 XPO4Q9C0E2 1151 aaKnown RBP11.03□□□□□ -0.64
PSMA4-207ENST00000558635 NLRC4Q9NPP4 1024 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 CD207Q9UJ71 328 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 PLXNA3P51805 1871 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 PRUNE2Q8WUY3 3088 aa11.03□□□□□ -0.64
PSMA4-207ENST00000558635 BRWD1Q9NSI6 2320 aa11.02□□□□□ -0.64
PSMA4-207ENST00000558635 AP5Z1O43299 807 aa11.02□□□□□ -0.65
PSMA4-207ENST00000558635 CBFA2T2O43439 604 aa11.02□□□□□ -0.65
PSMA4-207ENST00000558635 XYLBO75191 536 aa11.02□□□□□ -0.65
PSMA4-207ENST00000558635 PAPLNO95428 1278 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms