RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 ANO5Q75V66 913 aa7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 SYT12Q8IV01 421 aa7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 ARID3BQ8IVW6 561 aaPredicted RBP7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 MB21D2Q8IYB1 491 aaPredicted RBP7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 TRIM22Q8IYM9 498 aa7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 SHKBP1Q8TBC3 707 aa7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 TCP11Q8WWU5 503 aa7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 GTPBP3Q969Y2 492 aaKnown RBP7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 TMEM143Q96AN5 459 aa7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 LENG9Q96B70 501 aa7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 ZNF837Q96EG3 531 aaPredicted RBP7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 MTA3Q9BTC8 594 aa7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 UNC45AQ9H3U1 944 aa7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 TTC12Q9H892 705 aaPredicted RBP7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 DDX19AQ9NUU7 478 aaKnown RBP7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 POLR3BQ9NW08 1133 aaPredicted RBP7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 BARHL2Q9NY43 387 aa7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 OBP2AQ9NY56 170 aa7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 TPCN1Q9ULQ1 816 aa7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 PPME1Q9Y570 386 aa7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 SLC12A7Q9Y666 1083 aa7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 MORC2Q9Y6X9 1032 aaPredicted RBP7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 PTPRQQ9UMZ3 2332 aa7.43□□□□□ -1.22
SPTLC2-206ENST00000557566 PTPRDP23468 1912 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 CEP192Q8TEP8 1941 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 TMEM189-UBE2V1I3L0A0 370 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 TRDMT1O14717 391 aaKnown RBP7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 SEC24AO95486 1093 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 EGFP01133 1207 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 CFIP05156 583 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 ARF4P18085 180 aaPredicted RBP7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 PDCP20941 246 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 SYT1P21579 422 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 DRD1P21728 446 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 BCKDHBP21953 392 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 MPSTP25325 297 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 MARSP56192 900 aaKnown RBP7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 ARPP19P56211 112 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 PTENP60484 403 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 GFPT1Q06210 699 aaPredicted RBP7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 TWF1Q12792 350 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 DMC1Q14565 340 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 LPCAT2Q7L5N7 544 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 FERMT3Q86UX7 667 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 REXO1Q8N1G1 1221 aaKnown RBP7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 FANCBQ8NB91 859 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 TSTD1Q8NFU3 115 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 RPLP0P6Q8NHW5 317 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 PIP4K2CQ8TBX8 421 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 BPIFB1Q8TDL5 484 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 SLC5A5Q92911 643 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 EXOC4Q96A65 974 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 GTPBP2Q9BX10 602 aaKnown RBP7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 TPSD1Q9BZJ3 242 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 KCNF1Q9H3M0 494 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 DHX33Q9H6R0 707 aaKnown RBP7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 THG1LQ9NWX6 298 aaKnown RBP7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 CEP72Q9P209 647 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 MBD1Q9UIS9 605 aaPredicted RBP7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 SMC3Q9UQE7 1217 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 APOBEC2Q9Y235 224 aaKnown RBP7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 CNTNAP5Q8WYK1 1306 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 PLXND1Q9Y4D7 1925 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 ZNF638Q14966 1978 aaKnown RBP7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 TRIP11Q15643 1979 aa7.42□□□□□ -1.22
SPTLC2-206ENST00000557566 TSC2P49815 1807 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 TEP1Q99973 2627 aaKnown RBP7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 PCDH15Q96QU1 1955 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 CCDC66A2RUB6 948 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 SH2B2O14492 632 aaPredicted RBP7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 PTGESO14684 152 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 PRC1O43663 620 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 DKC1O60832 514 aaKnown RBP eCLIP7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 B3GAT3O94766 335 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 NTRK1P04629 796 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 HOXD12P35452 270 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 EIF1AXP47813 144 aaKnown RBP7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 NPEPPSP55786 919 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 PSMC5P62195 406 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 CBX1P83916 185 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 CFHR1Q03591 330 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 SLC20A2Q08357 652 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 KCNMA1Q12791 1236 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 TFDP1Q14186 410 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 MXD4Q14582 209 aaPredicted RBP7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 EMC2Q15006 297 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 DBN1Q16643 649 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 LMBRD2Q68DH5 695 aaPredicted RBP7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 SARM1Q6SZW1 724 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 MICU3Q86XE3 530 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 RAB11FIP4Q86YS3 637 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 ETFBKMTQ8IXQ9 262 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 MINDY1Q8N5J2 469 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 PNPLA1Q8N8W4 532 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 CEP76Q8TAP6 659 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 RUFY2Q8WXA3 655 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 IFT43Q96FT9 208 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 TMEM87BQ96K49 555 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 SPACA7Q96KW9 195 aa7.41□□□□□ -1.22
SPTLC2-206ENST00000557566 CEP170P1Q96L14 293 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms