RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 PAIP2Q9BPZ3 127 aaKnown RBP20.26■□□□□ 0.83
FOXN3-214ENST00000557258 OSBPL7Q9BZF2 842 aa20.26■□□□□ 0.83
FOXN3-214ENST00000557258 TUBGCP4Q9UGJ1 667 aa20.26■□□□□ 0.83
FOXN3-214ENST00000557258 STRIP2Q9ULQ0 834 aa20.26■□□□□ 0.83
FOXN3-214ENST00000557258 DNALI1O14645 258 aaPredicted RBP20.26■□□□□ 0.83
FOXN3-214ENST00000557258 MCF2P10911 925 aa20.26■□□□□ 0.83
FOXN3-214ENST00000557258 BRAFP15056 766 aa20.26■□□□□ 0.83
FOXN3-214ENST00000557258 AKAP5P24588 427 aa20.26■□□□□ 0.83
FOXN3-214ENST00000557258 GPD2P43304 727 aa20.26■□□□□ 0.83
FOXN3-214ENST00000557258 LDLRAD1Q5T700 205 aa20.26■□□□□ 0.83
FOXN3-214ENST00000557258 FAM71DQ8N9W8 422 aa20.26■□□□□ 0.83
FOXN3-214ENST00000557258 CFAP57Q96MR6 1250 aa20.26■□□□□ 0.83
FOXN3-214ENST00000557258 MRPL45Q9BRJ2 306 aaKnown RBP20.26■□□□□ 0.83
FOXN3-214ENST00000557258 H0YHG0 523 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 SCYL2Q6P3W7 929 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 TAOK1Q7L7X3 1001 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 SESTD1Q86VW0 696 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 B3GNT5Q9BYG0 378 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.25■□□□□ 0.839e-7■■■□□ 15.7
FOXN3-214ENST00000557258 KLK14Q9P0G3 267 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 GOLGA6L7A0A1B0GV03 622 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 TCRBV7S3A2A0A539 114 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 KDELR1P24390 212 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 PDIA2Q13087 525 aaKnown RBP20.25■□□□□ 0.83
FOXN3-214ENST00000557258 EFTUD2Q15029 972 aaKnown RBP eCLIP20.25■□□□□ 0.833e-7■■■■□ 23
FOXN3-214ENST00000557258 TNFAIP8L3Q5GJ75 292 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 MFSD5Q6N075 450 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 GPR142Q7Z601 462 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 UNC45BQ8IWX7 931 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 ZCCHC9Q8N567 271 aaKnown RBP20.25■□□□□ 0.83
FOXN3-214ENST00000557258 LINC01465Q8N7H1 131 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 OR6J1Q8NGC5 347 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 MS4A4AQ96JQ5 239 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 TMEM109Q9BVC6 243 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 KATNBL1Q9H079 304 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 PNMA3Q9UL41 463 aa20.25■□□□□ 0.83
FOXN3-214ENST00000557258 TRIP11Q15643 1979 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 EXOC1LA0A1B0GW35 172 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 TCP11X1B4DZS4 312 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 CCNA1P78396 465 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 TTC31Q49AM3 519 aaPredicted RBP20.24■□□□□ 0.83
FOXN3-214ENST00000557258 C6orf89Q6UWU4 347 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 FAM183BPQ6ZVS7 135 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 MICALCLQ6ZW33 695 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 SCUBE3Q8IX30 993 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 MIS12Q9H081 205 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 LHX5Q9H2C1 402 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 FGFR1OP2Q9NVK5 253 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 GJD2Q9UKL4 321 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 TPX2Q9ULW0 747 aaKnown RBP20.24■□□□□ 0.83
FOXN3-214ENST00000557258 USP18Q9UMW8 372 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 DYNC1LI2O43237 492 aaPredicted RBP20.24■□□□□ 0.83
FOXN3-214ENST00000557258 CTCFP49711 727 aaPredicted RBP20.24■□□□□ 0.83
FOXN3-214ENST00000557258 MYO1EQ12965 1108 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 MSS51Q4VC12 460 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 PPP1R26Q5T8A7 1209 aaPredicted RBP20.24■□□□□ 0.83
FOXN3-214ENST00000557258 LRRC38Q5VT99 294 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 CCDC121Q6ZUS5 278 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 C7orf31Q8N865 590 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 THOC1Q96FV9 657 aaKnown RBP20.24■□□□□ 0.83
FOXN3-214ENST00000557258 SERPINB12Q96P63 405 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 MAGEB5Q9BZ81 275 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 NME7Q9Y5B8 376 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 SCN1AP35498 2009 aa20.24■□□□□ 0.83
FOXN3-214ENST00000557258 DNM1LO00429 736 aa20.23■□□□□ 0.83
FOXN3-214ENST00000557258 MMP3P08254 477 aa20.23■□□□□ 0.83
FOXN3-214ENST00000557258 GCLCP48506 637 aaPredicted RBP20.23■□□□□ 0.83
FOXN3-214ENST00000557258 CAV1Q03135 178 aa20.23■□□□□ 0.83
FOXN3-214ENST00000557258 GOLGA7BQ2TAP0 167 aa20.23■□□□□ 0.83
FOXN3-214ENST00000557258 PPP1R2P3Q6NXS1 205 aa20.23■□□□□ 0.83
FOXN3-214ENST00000557258 NIPA2Q8N8Q9 360 aa20.23■□□□□ 0.83
FOXN3-214ENST00000557258 ROPN1BQ9BZX4 212 aaPredicted RBP20.23■□□□□ 0.83
FOXN3-214ENST00000557258 NXF3Q9H4D5 531 aaKnown RBP20.23■□□□□ 0.83
FOXN3-214ENST00000557258 ROPN1Q9HAT0 212 aaPredicted RBP20.23■□□□□ 0.83
FOXN3-214ENST00000557258 MAGEB2O15479 319 aa20.23■□□□□ 0.83
FOXN3-214ENST00000557258 PDGFRAP16234 1089 aa20.23■□□□□ 0.83
FOXN3-214ENST00000557258 C1orf228Q6PIY5 440 aa20.23■□□□□ 0.83
FOXN3-214ENST00000557258 C4orf33Q8N1A6 199 aa20.23■□□□□ 0.83
FOXN3-214ENST00000557258 NPLOC4Q8TAT6 608 aa20.23■□□□□ 0.83
FOXN3-214ENST00000557258 RXFP2Q8WXD0 754 aa20.23■□□□□ 0.83
FOXN3-214ENST00000557258 STMN4Q9H169 189 aaPredicted RBP20.23■□□□□ 0.83
FOXN3-214ENST00000557258 DPEP3Q9H4B8 488 aa20.23■□□□□ 0.83
FOXN3-214ENST00000557258 NGRNQ9NPE2 291 aaKnown RBP20.23■□□□□ 0.83
FOXN3-214ENST00000557258 DDX56Q9NY93 547 aaKnown RBP20.23■□□□□ 0.83
FOXN3-214ENST00000557258 RASA4BC9J798 803 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 RASA4O43374 803 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 PDGFRBP09619 1106 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 TFE3P19532 575 aaPredicted RBP20.22■□□□□ 0.83
FOXN3-214ENST00000557258 CDH6P55285 790 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 ZNF200P98182 395 aaPredicted RBP20.22■□□□□ 0.83
FOXN3-214ENST00000557258 TNFAIP2Q03169 654 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 TAP1Q03518 808 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 HADHQ16836 314 aaKnown RBP20.22■□□□□ 0.83
FOXN3-214ENST00000557258 CCDC142Q17RM4 750 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 FNBP1LQ5T0N5 605 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 RNASEH2BQ5TBB1 312 aaKnown RBP20.22■□□□□ 0.83
FOXN3-214ENST00000557258 PMF1Q6P1K2 205 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 MAML3Q96JK9 1138 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 GOLGA2P5Q9HBQ8 144 aa20.22■□□□□ 0.83
FOXN3-214ENST00000557258 VTA1Q9NP79 307 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms