RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 MYH10P35580 1976 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 TRIM66O15016 1216 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 NOL4O94818 638 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 MAGEA11P43364 429 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 IFNAR2P48551 515 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 CASP4P49662 377 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 MYL6P60660 151 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 AMPD2Q01433 879 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 FAM160A1Q05DH4 1040 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 EHHADHQ08426 723 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 GRSF1Q12849 480 aaKnown RBP eCLIP11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 PSMD2Q13200 908 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 CEP135Q66GS9 1140 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 VSTM1Q6UX27 236 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 Q6ZS52 159 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 DENND5BQ6ZUT9 1274 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 ZNF687Q8N1G0 1237 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 SPEM1Q8N4L4 309 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 SUMF1Q8NBK3 374 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 ZBTB44Q8NCP5 570 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 GOLGA5Q8TBA6 731 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 ZNF516Q92618 1163 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 TRMT2BQ96GJ1 504 aaKnown RBP11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 PCED1BQ96HM7 432 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 PKMYT1Q99640 499 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 MED10Q9BTT4 135 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 CRTAC1Q9NQ79 661 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 DUS2Q9NX74 493 aaKnown RBP11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 EHD2Q9NZN4 543 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 TRPM5Q9NZQ8 1165 aa11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 SMG5Q9UPR3 1016 aaKnown RBP11.29□□□□□ -0.6
SPTLC2-205ENST00000556607 C2orf78A6NCI8 922 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 SOBPA7XYQ1 873 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 CHURC1-FNTBB4DL54 471 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 ACTN4O43707 911 aaKnown RBP11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 KLRC4O43908 158 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 TADA3O75528 432 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 ARSAP15289 507 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 PTPN1P18031 435 aaKnown RBP11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 HDCP19113 662 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 CMA1P23946 247 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 ATICP31939 592 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 SYKP43405 635 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 FNTBP49356 437 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 STK4Q13043 487 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 GAS6Q14393 721 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 MTF1Q14872 753 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 BMT2Q1RMZ1 405 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 ZNF699Q32M78 642 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 ZNF667Q5HYK9 610 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 SCARA5Q6ZMJ2 495 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 C12orf56Q8IXR9 622 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 CPA6Q8N4T0 437 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 MYCBPAPQ8TBZ2 947 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 EXOC4Q96A65 974 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 CHAMP1Q96JM3 812 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 MYRFLQ96LU7 910 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 FAM83CQ9BQN1 747 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 DPEP3Q9H4B8 488 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 HPS4Q9NQG7 708 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 USP18Q9UMW8 372 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 FRMD4BQ9Y2L6 1034 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 ATP6V1DQ9Y5K8 247 aa11.28□□□□□ -0.6
SPTLC2-205ENST00000556607 LRRIQ3A6PVS8 624 aaPredicted RBP11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 F8VP50 259 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 CLDN5O00501 218 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 CALUO43852 315 aaPredicted RBP11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 LILRB5O75023 590 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 TACC1O75410 805 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 KIF20AO95235 890 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 RPN1P04843 607 aaKnown RBP11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 RAP1GAPP47736 663 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 PDE6CP51160 858 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 AP3M2P53677 418 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 CDH8P55286 799 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 NR1H3Q13133 447 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 SIM2Q14190 667 aaPredicted RBP11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 ZNF268Q14587 947 aaPredicted RBP11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 PDGFRLQ15198 375 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 TDRD10Q5VZ19 366 aaKnown RBP11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 CEP68Q76N32 757 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 SYNPOQ8N3V7 929 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 KIAA0895Q8NCT3 520 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 SH3RF2Q8TEC5 729 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 ELMO3Q96BJ8 720 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 SPATA17Q96L03 361 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 SLC22A12Q96S37 553 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 EPC1Q9H2F5 836 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 USP25Q9UHP3 1055 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 WNT6Q9Y6F9 365 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 ATG2BQ96BY7 2078 aa11.27□□□□□ -0.61
SPTLC2-205ENST00000556607 VPS13AQ96RL7 3174 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 ATG13O75143 517 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 NR3C1P04150 777 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 FAM163BP0C2L3 166 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 P4HA1P13674 534 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 GALK1P51570 392 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 NDUFA8P51970 172 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 USP46P62068 366 aa11.26□□□□□ -0.61
SPTLC2-205ENST00000556607 DLG4P78352 724 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms