RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 P2RY13Q9BPV8 354 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 PCIF1Q9H4Z3 704 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 TMEM30AQ9NV96 361 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ITGA11Q9UKX5 1188 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 SNX9Q9Y5X1 595 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 FOXD2O60548 495 aaPredicted RBP15.4■□□□□ 0.06
CHMP4BP1-201ENST00000556017 HUS1O60921 280 aa15.4■□□□□ 0.06
CHMP4BP1-201ENST00000556017 GCNT3O95395 438 aa15.4■□□□□ 0.06
CHMP4BP1-201ENST00000556017 TCF3P15923 654 aa15.4■□□□□ 0.06
CHMP4BP1-201ENST00000556017 OPRD1P41143 372 aa15.4■□□□□ 0.06
CHMP4BP1-201ENST00000556017 RPL10AP62906 217 aaKnown RBP15.4■□□□□ 0.06
CHMP4BP1-201ENST00000556017 MESP2Q0VG99 397 aa15.4■□□□□ 0.06
CHMP4BP1-201ENST00000556017 STPG1Q5TH74 334 aa15.4■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ADGRF2Q8IZF7 708 aa15.4■□□□□ 0.06
CHMP4BP1-201ENST00000556017 TOP6BLQ8N6T0 577 aa15.4■□□□□ 0.06
CHMP4BP1-201ENST00000556017 SPATA18Q8TC71 538 aa15.4■□□□□ 0.06
CHMP4BP1-201ENST00000556017 TMEM206Q9H813 350 aa15.4■□□□□ 0.06
CHMP4BP1-201ENST00000556017 INTS13Q9NVM9 706 aa15.4■□□□□ 0.06
CHMP4BP1-201ENST00000556017 SLC8A2Q9UPR5 921 aa15.4■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.4■□□□□ 0.06
CHMP4BP1-201ENST00000556017 PLXND1Q9Y4D7 1925 aa15.4■□□□□ 0.06
CHMP4BP1-201ENST00000556017 SPEGQ15772 3267 aa15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 K7EQS6 105 aa15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 ATG13O75143 517 aa15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 PRPF6O94906 941 aaKnown RBP15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 MPLP40238 635 aa15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 MAGEA11P43364 429 aa15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 AASDHQ4L235 1098 aaPredicted RBP15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 RRAGBQ5VZM2 374 aa15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 SV2BQ7L1I2 683 aa15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 SFTPA1Q8IWL2 248 aa15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 SH3RF2Q8TEC5 729 aa15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 CD101Q93033 1021 aa15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 HPS3Q969F9 1004 aa15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 FUBP3Q96I24 572 aaKnown RBP eCLIP15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 PANK2Q9BZ23 570 aa15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 GZF1Q9H116 711 aaPredicted RBP15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 TRPC7Q9HCX4 862 aa15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 DUS2Q9NX74 493 aaKnown RBP15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 UXTQ9UBK9 157 aaPredicted RBP15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 EBF1Q9UH73 591 aa15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 PCDHGA5Q9Y5G8 931 aa15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 MORC2Q9Y6X9 1032 aaPredicted RBP15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 ASCC3Q8N3C0 2202 aaKnown RBP15.39■□□□□ 0.05
CHMP4BP1-201ENST00000556017 GON4LQ3T8J9 2241 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 LDHAP00338 332 aaKnown RBP15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 USP17L7P0C7H9 530 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 CCDC192P0DO97 292 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 HNRNPLP14866 589 aaKnown RBP eCLIP15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 LHX1P48742 406 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 CACNA2D1P54289 1103 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 PSMC1P62191 440 aaKnown RBP15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 RBP5P82980 135 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 MYL7Q01449 175 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 DMC1Q14565 340 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 ST3GAL2Q16842 350 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 FBXO43Q4G163 708 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 CBWD2Q8IUF1 395 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 CPA6Q8N4T0 437 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 USP33Q8TEY7 942 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 CACTINQ8WUQ7 758 aaKnown RBP15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 USP28Q96RU2 1077 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 TTLL2Q9BWV7 592 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 LSM14BQ9BX40 385 aaKnown RBP15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 RNF38Q9H0F5 515 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 CCDC39Q9UFE4 941 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 ARHGAP26Q9UNA1 814 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 EXOC7Q9UPT5 735 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 PCDHB13Q9Y5F0 798 aa15.38■□□□□ 0.05
CHMP4BP1-201ENST00000556017 IGF2RP11717 2491 aa15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 PI4KAP42356 2102 aa15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 TRAV19A0A0A6YYK7 116 aa15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 BCLAF3A2AJT9 711 aaKnown RBP15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 VPS37CA5D8V6 355 aaPredicted RBP15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 OLFM2O95897 454 aa15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 CKMP06732 381 aa15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 KRT19P08727 400 aa15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 IDEP14735 1019 aa15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 SHC2P98077 582 aa15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 CEBPZQ03701 1054 aaKnown RBP15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 E2F4Q16254 413 aa15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 CC2D1AQ6P1N0 951 aaPredicted RBP15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 DPH6Q7L8W6 267 aa15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 SPATA2LQ8IUW3 424 aaPredicted RBP15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 SCN4BQ8IWT1 228 aa15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 GPD1LQ8N335 351 aa15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 DDX1Q92499 740 aaKnown RBP15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 ATP2A3Q93084 1043 aa15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 MYLPFQ96A32 169 aa15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 SPATA17Q96L03 361 aa15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 SYT15Q9BQS2 421 aa15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 PANK4Q9NVE7 773 aa15.37■□□□□ 0.05
CHMP4BP1-201ENST00000556017 TGFB1I1O43294 461 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 KCNK5O95279 499 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 APBB3O95704 486 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 CST3P01034 146 aaPredicted RBP15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 HDCP19113 662 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 SYT1P21579 422 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 BCKDHBP21953 392 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 WARSP23381 471 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms