RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 COL4A3Q01955 1670 aa16.48■□□□□ 0.23
SNX6-205ENST00000555648 ACTN4O43707 911 aaKnown RBP16.47■□□□□ 0.23
SNX6-205ENST00000555648 TACC1O75410 805 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 MYL6P60660 151 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 FAM160A1Q05DH4 1040 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 ZNF268Q14587 947 aaPredicted RBP16.47■□□□□ 0.23
SNX6-205ENST00000555648 CCDC142Q17RM4 750 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 TXNDC11Q6PKC3 985 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 DENND5BQ6ZUT9 1274 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 LIMS2Q7Z4I7 341 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 SYNPOQ8N3V7 929 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 MYCBPAPQ8TBZ2 947 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 CCDC34Q96HJ3 373 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 PCED1BQ96HM7 432 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 SPATA17Q96L03 361 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 MRPL45Q9BRJ2 306 aaKnown RBP16.47■□□□□ 0.23
SNX6-205ENST00000555648 EBF3Q9H4W6 596 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 CRTAC1Q9NQ79 661 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 TRPM5Q9NZQ8 1165 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 GMEB2Q9UKD1 530 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 SMG5Q9UPR3 1016 aaKnown RBP16.47■□□□□ 0.23
SNX6-205ENST00000555648 CCL26Q9Y258 94 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 FRMD4BQ9Y2L6 1034 aa16.47■□□□□ 0.23
SNX6-205ENST00000555648 CALUO43852 315 aaPredicted RBP16.46■□□□□ 0.23
SNX6-205ENST00000555648 P4HA1P13674 534 aa16.46■□□□□ 0.23
SNX6-205ENST00000555648 HDCP19113 662 aa16.46■□□□□ 0.23
SNX6-205ENST00000555648 IFNAR2P48551 515 aa16.46■□□□□ 0.23
SNX6-205ENST00000555648 SATB1Q01826 763 aa16.46■□□□□ 0.23
SNX6-205ENST00000555648 STK4Q13043 487 aa16.46■□□□□ 0.23
SNX6-205ENST00000555648 MTF1Q14872 753 aa16.46■□□□□ 0.23
SNX6-205ENST00000555648 ZNF699Q32M78 642 aa16.46■□□□□ 0.23
SNX6-205ENST00000555648 ZNF667Q5HYK9 610 aa16.46■□□□□ 0.23
SNX6-205ENST00000555648 TRIM68Q6AZZ1 485 aa16.46■□□□□ 0.23
SNX6-205ENST00000555648 CPA6Q8N4T0 437 aa16.46■□□□□ 0.23
SNX6-205ENST00000555648 SUMF1Q8NBK3 374 aa16.46■□□□□ 0.23
SNX6-205ENST00000555648 FAM83CQ9BQN1 747 aa16.46■□□□□ 0.23
SNX6-205ENST00000555648 SCAND2PQ9GZW5 306 aaPredicted RBP16.46■□□□□ 0.23
SNX6-205ENST00000555648 GTF3C3Q9Y5Q9 886 aa16.46■□□□□ 0.23
SNX6-205ENST00000555648 ATP8B3O60423 1300 aa16.45■□□□□ 0.22
SNX6-205ENST00000555648 TSC2P49815 1807 aa16.45■□□□□ 0.22
SNX6-205ENST00000555648 KLRC4O43908 158 aa16.45■□□□□ 0.22
SNX6-205ENST00000555648 STAU1O95793 577 aaKnown RBP16.45■□□□□ 0.22
SNX6-205ENST00000555648 ABL1P00519 1130 aa16.45■□□□□ 0.22
SNX6-205ENST00000555648 RPN1P04843 607 aaKnown RBP16.45■□□□□ 0.22
SNX6-205ENST00000555648 PTPN1P18031 435 aaKnown RBP16.45■□□□□ 0.22
SNX6-205ENST00000555648 TRIM21P19474 475 aaKnown RBP16.45■□□□□ 0.22
SNX6-205ENST00000555648 PPP3CCP48454 512 aa16.45■□□□□ 0.22
SNX6-205ENST00000555648 CASP4P49662 377 aa16.45■□□□□ 0.22
SNX6-205ENST00000555648 NR1H3Q13133 447 aa16.45■□□□□ 0.22
SNX6-205ENST00000555648 NCOA4Q13772 614 aa16.45■□□□□ 0.22
SNX6-205ENST00000555648 TDRD10Q5VZ19 366 aaKnown RBP16.45■□□□□ 0.22
SNX6-205ENST00000555648 CEP135Q66GS9 1140 aa16.45■□□□□ 0.22
SNX6-205ENST00000555648 PRR23BQ6ZRT6 265 aa16.45■□□□□ 0.22
SNX6-205ENST00000555648 GPR161Q8N6U8 529 aaKnown RBP16.45■□□□□ 0.22
SNX6-205ENST00000555648 ARL14EPQ8N8R7 260 aaPredicted RBP16.45■□□□□ 0.22
SNX6-205ENST00000555648 ZNF516Q92618 1163 aa16.45■□□□□ 0.22
SNX6-205ENST00000555648 NELL1Q92832 810 aa16.45■□□□□ 0.22
SNX6-205ENST00000555648 CYP2S1Q96SQ9 504 aa16.45■□□□□ 0.22
SNX6-205ENST00000555648 MED10Q9BTT4 135 aa16.45■□□□□ 0.22
SNX6-205ENST00000555648 ELOVL4Q9GZR5 314 aa16.45■□□□□ 0.22
SNX6-205ENST00000555648 EPC1Q9H2F5 836 aa16.45■□□□□ 0.22
SNX6-205ENST00000555648 DUS2Q9NX74 493 aaKnown RBP16.45■□□□□ 0.22
SNX6-205ENST00000555648 ANK1P16157 1881 aa16.45■□□□□ 0.22
SNX6-205ENST00000555648 F8VP50 259 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 PDXKO00764 312 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 LILRB5O75023 590 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 ATG13O75143 517 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 TADA3O75528 432 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 NR3C1P04150 777 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 ARSAP15289 507 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 Q6ZS52 159 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 SLC9A9Q8IVB4 645 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 DCLK2Q8N568 766 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 B3GALNT2Q8NCR0 500 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 KIAA0895Q8NCT3 520 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 PARD3BQ8TEW8 1205 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 OSCP1Q8WVF1 389 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 ATP2A3Q93084 1043 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 TNIP3Q96KP6 325 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 C8orf48Q96LL4 319 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 SLITRK1Q96PX8 696 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 HPS4Q9NQG7 708 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 MIA3Q5JRA6 1907 aa16.44■□□□□ 0.22
SNX6-205ENST00000555648 RIF1Q5UIP0 2472 aaKnown RBP16.43■□□□□ 0.22
SNX6-205ENST00000555648 C2orf78A6NCI8 922 aa16.43■□□□□ 0.22
SNX6-205ENST00000555648 LRRIQ3A6PVS8 624 aaPredicted RBP16.43■□□□□ 0.22
SNX6-205ENST00000555648 PFKLP17858 780 aa16.43■□□□□ 0.22
SNX6-205ENST00000555648 FOXK2Q01167 660 aa16.43■□□□□ 0.22
SNX6-205ENST00000555648 IFRD2Q12894 506 aaPredicted RBP16.43■□□□□ 0.22
SNX6-205ENST00000555648 CCINQ13939 588 aa16.43■□□□□ 0.22
SNX6-205ENST00000555648 GAS6Q14393 721 aa16.43■□□□□ 0.22
SNX6-205ENST00000555648 HEATR6Q6AI08 1181 aaKnown RBP16.43■□□□□ 0.22
SNX6-205ENST00000555648 SCARA5Q6ZMJ2 495 aa16.43■□□□□ 0.22
SNX6-205ENST00000555648 LONP2Q86WA8 852 aa16.43■□□□□ 0.22
SNX6-205ENST00000555648 SH3RF2Q8TEC5 729 aa16.43■□□□□ 0.22
SNX6-205ENST00000555648 IMPG2Q9BZV3 1241 aa16.43■□□□□ 0.22
SNX6-205ENST00000555648 HPSEQ9Y251 543 aa16.43■□□□□ 0.22
SNX6-205ENST00000555648 F5P12259 2224 aa16.43■□□□□ 0.22
SNX6-205ENST00000555648 FAM186AA6NE01 2351 aa16.43■□□□□ 0.22
SNX6-205ENST00000555648 CACNA1IQ9P0X4 2223 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms