RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 SSX2IPQ9Y2D8 614 aa4.92□□□□□ -1.62
SCFD1-214ENST00000554819 VWC2LB2RUY7 222 aa4.91□□□□□ -1.62
SCFD1-214ENST00000554819 hCG_1984214I3L0E3 225 aa4.91□□□□□ -1.62
SCFD1-214ENST00000554819 FOXN3O00409 490 aaPredicted RBP4.91□□□□□ -1.62
SCFD1-214ENST00000554819 RASSF9O75901 435 aa4.91□□□□□ -1.62
SCFD1-214ENST00000554819 PDE6CP51160 858 aa4.91□□□□□ -1.62
SCFD1-214ENST00000554819 PRKAG1P54619 331 aa4.91□□□□□ -1.62
SCFD1-214ENST00000554819 ELLP55199 621 aaPredicted RBP4.91□□□□□ -1.62
SCFD1-214ENST00000554819 SOX10P56693 466 aa4.91□□□□□ -1.62
SCFD1-214ENST00000554819 FAM153CQ494X1 144 aa4.91□□□□□ -1.62
SCFD1-214ENST00000554819 DCAF12L1Q5VU92 463 aa4.91□□□□□ -1.62
SCFD1-214ENST00000554819 IPCEF1Q8WWN9 437 aaPredicted RBP4.91□□□□□ -1.62
SCFD1-214ENST00000554819 MAML1Q92585 1016 aa4.91□□□□□ -1.62
SCFD1-214ENST00000554819 NELL1Q92832 810 aa4.91□□□□□ -1.62
SCFD1-214ENST00000554819 RFKQ969G6 155 aa4.91□□□□□ -1.62
SCFD1-214ENST00000554819 MSLNLQ96KJ4 702 aa4.91□□□□□ -1.62
SCFD1-214ENST00000554819 STRBPQ96SI9 672 aaKnown RBP4.91□□□□□ -1.62
SCFD1-214ENST00000554819 ALG13Q9NP73 1137 aaKnown RBP4.91□□□□□ -1.62
SCFD1-214ENST00000554819 SERHLQ9NQF3 203 aa4.91□□□□□ -1.62
SCFD1-214ENST00000554819 TRMT13Q9NUP7 481 aaKnown RBP4.91□□□□□ -1.62
SCFD1-214ENST00000554819 SH2B3Q9UQQ2 575 aa4.91□□□□□ -1.62
SCFD1-214ENST00000554819 MRPS17Q9Y2R5 130 aaKnown RBP4.91□□□□□ -1.62
SCFD1-214ENST00000554819 PCDHGB6Q9Y5F9 930 aa4.91□□□□□ -1.62
SCFD1-214ENST00000554819 TMEM233B4DJY2 109 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 CCP110O43303 1012 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 SUV39H1O43463 412 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 PPFIA2O75334 1257 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 NDUFB7P17568 137 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 KCNA3P22001 575 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 EIF2B5Q13144 721 aaKnown RBP4.9□□□□□ -1.63
SCFD1-214ENST00000554819 C3orf38Q5JPI3 329 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 AKNAD1Q5T1N1 836 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 ZNF551Q7Z340 670 aaPredicted RBP4.9□□□□□ -1.63
SCFD1-214ENST00000554819 SESTD1Q86VW0 696 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 CCAR1Q8IX12 1150 aaKnown RBP4.9□□□□□ -1.63
SCFD1-214ENST00000554819 DNAJC10Q8IXB1 793 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 SPARTQ8N0X7 666 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 KRT78Q8N1N4 520 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 SMCR8Q8TEV9 937 aaPredicted RBP4.9□□□□□ -1.63
SCFD1-214ENST00000554819 ATG4AQ8WYN0 398 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 PHKBQ93100 1093 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 PPP2R3CQ969Q6 453 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 UROC1Q96N76 676 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 HAPLN3Q96S86 360 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 TIMP4Q99727 224 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 SARGQ9BW04 601 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 STK31Q9BXU1 1019 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 GLOD4Q9HC38 313 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 ARHGEF3Q9NR81 526 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 SERTAD4Q9NUC0 356 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 COL20A1Q9P218 1284 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 RGS17Q9UGC6 210 aaPredicted RBP4.9□□□□□ -1.63
SCFD1-214ENST00000554819 ENTPD2Q9Y5L3 495 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 SNX13Q9Y5W8 968 aa4.9□□□□□ -1.63
SCFD1-214ENST00000554819 LOC102723971A0A1B0GUV8 181 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 LINC00473A8K010 186 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 PQBP1O60828 265 aaKnown RBP4.89□□□□□ -1.63
SCFD1-214ENST00000554819 CAND2O75155 1236 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 INMTO95050 263 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 PDHA1P08559 390 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 FAM163BP0C2L3 166 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 PHKG2P15735 406 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 CLK3P49761 638 aaKnown RBP4.89□□□□□ -1.63
SCFD1-214ENST00000554819 RPS16P62249 146 aaKnown RBP4.89□□□□□ -1.63
SCFD1-214ENST00000554819 SLC29A2Q14542 456 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 SAFBQ15424 915 aaKnown RBP eCLIP4.89□□□□□ -1.63
SCFD1-214ENST00000554819 ZIK1Q3SY52 487 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-214ENST00000554819 COBLL1Q53SF7 1204 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 TREML2Q5T2D2 321 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 ANKRD16Q6P6B7 361 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 WDR53Q7Z5U6 358 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-214ENST00000554819 YAF2Q8IY57 180 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 SDR16C5Q8N3Y7 309 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 OR56A3Q8NH54 315 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 BPIFB1Q8TDL5 484 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 OSCP1Q8WVF1 389 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 UNKQ9C0B0 810 aaKnown RBP4.89□□□□□ -1.63
SCFD1-214ENST00000554819 DHX36Q9H2U1 1008 aaKnown RBP4.89□□□□□ -1.63
SCFD1-214ENST00000554819 CXorf36Q9H7Y0 433 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 SEMA4GQ9NTN9 838 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 DKK3Q9UBP4 350 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 HDAC9Q9UKV0 1011 aa4.89□□□□□ -1.63
SCFD1-214ENST00000554819 A1L4Q6 167 aa4.88□□□□□ -1.63
SCFD1-214ENST00000554819 RHPN2P1A8MT19 583 aa4.88□□□□□ -1.63
SCFD1-214ENST00000554819 MGST3O14880 152 aa4.88□□□□□ -1.63
SCFD1-214ENST00000554819 CSF1RP07333 972 aa4.88□□□□□ -1.63
SCFD1-214ENST00000554819 TRIM27P14373 513 aa4.88□□□□□ -1.63
SCFD1-214ENST00000554819 WT1P19544 449 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-214ENST00000554819 PRKAR1BP31321 381 aa4.88□□□□□ -1.63
SCFD1-214ENST00000554819 ATXN1P54253 815 aaKnown RBP4.88□□□□□ -1.63
SCFD1-214ENST00000554819 CCNIQ14094 377 aa4.88□□□□□ -1.63
SCFD1-214ENST00000554819 ARHGEF7Q14155 803 aa4.88□□□□□ -1.63
SCFD1-214ENST00000554819 TSTD2Q5T7W7 516 aa4.88□□□□□ -1.63
SCFD1-214ENST00000554819 DEPDC1Q5TB30 811 aa4.88□□□□□ -1.63
SCFD1-214ENST00000554819 CCDC181Q5TID7 509 aa4.88□□□□□ -1.63
SCFD1-214ENST00000554819 ZDHHC24Q6UX98 284 aa4.88□□□□□ -1.63
SCFD1-214ENST00000554819 MAVSQ7Z434 540 aa4.88□□□□□ -1.63
SCFD1-214ENST00000554819 C11orf96Q7Z7L8 435 aa4.88□□□□□ -1.63
SCFD1-214ENST00000554819 ADGRG3Q86Y34 549 aa4.88□□□□□ -1.63
SCFD1-214ENST00000554819 ABRAQ8N0Z2 381 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms