RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 N4BP2L1Q5TBK1 243 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-229ENST00000554672 IL31Q6EBC2 164 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 CATSPER4Q7RTX7 472 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 GRASPQ7Z6J2 395 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-229ENST00000554672 ZNF410Q86VK4 478 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 MB21D2Q8IYB1 491 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-229ENST00000554672 LRRC56Q8IYG6 542 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-229ENST00000554672 RNF168Q8IYW5 571 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-229ENST00000554672 CNNM3Q8NE01 707 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 ST13P5Q8NFI4 369 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-229ENST00000554672 CRELD1Q96HD1 420 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 PGBD1Q96JS3 809 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 FDXACB1Q9BRP7 624 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-229ENST00000554672 IER2Q9BTL4 223 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 COLEC11Q9BWP8 271 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 RNF32Q9H0A6 362 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 TRIT1Q9H3H1 467 aaKnown RBP5.39□□□□□ -1.55
ATXN3-229ENST00000554672 RSAD1Q9HA92 442 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 PRMT8Q9NR22 394 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-229ENST00000554672 GPATCH2Q9NW75 528 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 FNIP2Q9P278 1114 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 PIN4Q9Y237 131 aaKnown RBP5.39□□□□□ -1.55
ATXN3-229ENST00000554672 SLC12A7Q9Y666 1083 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 CEP250Q9BV73 2442 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 CNTNAP2Q9UHC6 1331 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 CHD8Q9HCK8 2581 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 ZNF292O60281 2723 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 VPS13AQ96RL7 3174 aa5.39□□□□□ -1.55
ATXN3-229ENST00000554672 KMT2BQ9UMN6 2715 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-229ENST00000554672 IGLV3-22A0A075B6J6 115 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 IGKV6-21A0A0C4DH24 114 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 hCG_1984214I3L0E3 225 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 MAN2B1O00754 1011 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 SH2B2O14492 632 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-229ENST00000554672 PRC1O43663 620 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 BPNT1O95861 308 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 POMCP01189 267 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 TDGF1P13385 188 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 SFNP31947 248 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 MCM5P33992 734 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 CNR2P34972 360 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 LIMK1P53667 647 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 PTH1RQ03431 593 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 DRP2Q13474 957 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 SIM2Q14190 667 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-229ENST00000554672 LPAL2Q16609 132 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 XKR3Q5GH77 459 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 JAKMIP3Q5VZ66 844 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 WWC2Q6AWC2 1192 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 SYNE3Q6ZMZ3 975 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 TPRG1Q6ZUI0 275 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 TMTC3Q6ZXV5 915 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 CHD1LQ86WJ1 897 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 RHPN2Q8IUC4 686 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 SMC5Q8IY18 1101 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 COLGALT2Q8IYK4 626 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 ZNF713Q8N859 430 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-229ENST00000554672 RUFY2Q8WXA3 655 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 CRYGNQ8WXF5 182 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 FGF13Q92913 245 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 KREMEN1Q96MU8 473 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 MBOAT7Q96N66 472 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 JPH2Q9BR39 696 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-229ENST00000554672 PHF20Q9BVI0 1012 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 KRTAP4-2Q9BYR5 136 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 RWDD1Q9H446 243 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-229ENST00000554672 MARCH5Q9NX47 278 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 SUCLA2Q9P2R7 463 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-229ENST00000554672 KCNH3Q9ULD8 1083 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 ZNF281Q9Y2X9 895 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 PRG3Q9Y2Y8 225 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-229ENST00000554672 TAF6LQ9Y6J9 622 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 PLXNA4Q9HCM2 1894 aa5.38□□□□□ -1.55
ATXN3-229ENST00000554672 ETV2O00321 342 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-229ENST00000554672 MAFO75444 373 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-229ENST00000554672 TADA2AO75478 443 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 ECI2O75521 394 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 POU2F2P09086 479 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 ITGA4P13612 1032 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 NCLP19338 710 aaKnown RBP5.37□□□□□ -1.55
ATXN3-229ENST00000554672 RXRAP19793 462 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 HOXA9P31269 272 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 HOXA11P31270 313 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-229ENST00000554672 CIITAP33076 1130 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 CXCL12P48061 93 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 CCR3P51677 355 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 JAK3P52333 1124 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 PRKCEQ02156 737 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 TEKQ02763 1124 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 NUCB1Q02818 461 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 DSC1Q08554 894 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 NCBP1Q09161 790 aaKnown RBP5.37□□□□□ -1.55
ATXN3-229ENST00000554672 PRR16Q569H4 304 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 PPM1LQ5SGD2 360 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 LIN9Q5TKA1 542 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 RTL10Q7L3V2 364 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 SRGAP1Q7Z6B7 1085 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 RELL1Q8IUW5 271 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 EXOC8Q8IYI6 725 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 GOLM1Q8NBJ4 401 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms