RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 PRPF31Q8WWY3 499 aaKnown RBP6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 EDEM1Q92611 657 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 BRF1Q92994 677 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 TMEM175Q9BSA9 504 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 HERC2P3Q9BVR0 1158 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 YIPF2Q9BWQ6 316 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 NT5C3AQ9H0P0 336 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 MINDY3Q9H8M7 445 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 RXFP1Q9HBX9 757 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 HEBP1Q9NRV9 189 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 AGPAT5Q9NUQ2 364 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ZDHHC7Q9NXF8 308 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CDH7Q9ULB5 785 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 NDRG2Q9UN36 371 aaKnown RBP6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 SSX2IPQ9Y2D8 614 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 MRPS17Q9Y2R5 130 aaKnown RBP6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 HES2Q9Y543 173 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 COL4A3BPQ9Y5P4 624 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 U3KQE9 123 aa6.17□□□□□ -1.42
SMARCE1P3-201ENST00000553649 DOCK6Q96HP0 2047 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 NBPF19A0A087WUL8 3843 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 DOPEY1Q5JWR5 2465 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 A0A087WV48 116 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 IGKV6-21A0A0C4DH24 114 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ARL5CA6NH57 179 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 METTL12A8MUP2 240 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 H0Y626 953 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 EREGO14944 169 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PRPF3O43395 683 aaKnown RBP6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 EDIL3O43854 480 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PSMD10O75832 226 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ERLIN2O94905 339 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 STBD1O95210 358 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 TRIM16O95361 564 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 HOXA11P31270 313 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CD96P40200 585 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PSMC5P62195 406 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CCT2P78371 535 aaKnown RBP6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 SIM1P81133 766 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CYP27A1Q02318 531 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CFHR1Q03591 330 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 LAMTOR4Q0VGL1 99 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 MAP7Q14244 749 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ALKBH2Q6NS38 261 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 OGFOD3Q6PK18 319 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 Q6ZUG5 572 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ANO5Q75V66 913 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CACNA2D4Q7Z3S7 1137 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 GRASPQ7Z6J2 395 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 MRPL10Q7Z7H8 261 aaKnown RBP6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 WDR5BQ86VZ2 330 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 SKAP1Q86WV1 359 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 COLGALT2Q8IYK4 626 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 SPEM1Q8N4L4 309 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 RNF149Q8NC42 400 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CCDC148Q8NFR7 591 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 HASPINQ8TF76 798 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 GAB3Q8WWW8 586 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PSPC1Q8WXF1 523 aaKnown RBP6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CPB2Q96IY4 423 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CEP170P1Q96L14 293 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 JAKMIP1Q96N16 626 aaKnown RBP6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CEP89Q96ST8 783 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 KXD1Q9BQD3 176 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 JPH2Q9BR39 696 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 COLEC11Q9BWP8 271 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 EIF2AQ9BY44 585 aaKnown RBP6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 KRTAP9-3Q9BYQ3 159 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 TRIM6Q9C030 488 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 BHLHE41Q9C0J9 482 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PLEKHA4Q9H4M7 779 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 GSX1Q9H4S2 264 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 LMAN1LQ9HAT1 526 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 IFT122Q9HBG6 1241 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 NCOA5Q9HCD5 579 aaKnown RBP6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CACNG4Q9UBN1 327 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 IPPQ9Y573 584 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CNTNAP2Q9UHC6 1331 aa6.16□□□□□ -1.42
SMARCE1P3-201ENST00000553649 ASXL3Q9C0F0 2248 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 GREB1Q4ZG55 1949 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 APC2O95996 2303 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 INO80B-WBP1J3KQ70 363 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CCL16O15467 120 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 MARCH6O60337 910 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 TADA2AO75478 443 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 POU2F2P09086 479 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 CHRNB1P11230 501 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PTMSP20962 102 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 AKAP5P24588 427 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 DSG1Q02413 1049 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 DNM1Q05193 864 aaKnown RBP6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 NCBP1Q09161 790 aaKnown RBP6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 KRT32Q14532 448 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 EMC2Q15006 297 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 USP41Q3LFD5 358 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 Q4G0T1 1027 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 COLEC12Q5KU26 742 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 LIN9Q5TKA1 542 aa6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 PEAR1Q5VY43 1037 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1P3-201ENST00000553649 FUT10Q6P4F1 479 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms