RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 R3HCC1Q9Y3T6 440 aaKnown RBP15.22■□□□□ 0.03
CHMP1A-210ENST00000551981 C1QTNF9BB2RNN3 333 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 GIPC1O14908 333 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 ALDH1A2O94788 518 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 LDHAP00338 332 aaKnown RBP15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 C1QTNF9P0C862 333 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 CEACAM1P13688 526 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 TCF3P15923 654 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 PFKLP17858 780 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 HDCP19113 662 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 CSRP1P21291 193 aaKnown RBP15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 GJB2P29033 226 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 ADSSP30520 456 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 DDIT3P35638 169 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 SEC13P55735 322 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 C2orf27AQ580R0 203 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 ANO7Q6IWH7 933 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 C4orf50Q6ZRC1 276 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 SFR1Q86XK3 245 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 ADGRF2Q8IZF7 708 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 CSGALNACT2Q8N6G5 542 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 TOP6BLQ8N6T0 577 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 ARL14EPQ8N8R7 260 aaPredicted RBP15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 C1orf127Q8N9H9 656 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 USP33Q8TEY7 942 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 CNOT6LQ96LI5 555 aaKnown RBP15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 ACCSQ96QU6 501 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 PKMYT1Q99640 499 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 MRPL44Q9H9J2 332 aaKnown RBP15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 GDAP2Q9NXN4 497 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 RBAKQ9NYW8 714 aaPredicted RBP15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 GCNT4Q9P109 453 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 SEL1LQ9UBV2 794 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 ARHGAP26Q9UNA1 814 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 INVSQ9Y283 1065 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 SNX9Q9Y5X1 595 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 BAHCC1Q9P281 2608 aa15.21■□□□□ 0.03
CHMP1A-210ENST00000551981 WDFY3Q8IZQ1 3526 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 C2orf78A6NCI8 922 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 TMEM8BA6NDV4 472 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 KRT19P08727 400 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 GAP43P17677 238 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 MAGEA11P43364 429 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 DHPSP49366 369 aaPredicted RBP15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 RBP5P82980 135 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 DYMQ7RTS9 669 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 RASSF3Q86WH2 238 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 SAAL1Q96ER3 474 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 CEP295NLQ96MC4 621 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 ADAM33Q9BZ11 813 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 IKZF4Q9H2S9 585 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 LINC00597Q9H2U6 94 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 EHD2Q9NZN4 543 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 RALYQ9UKM9 306 aaKnown RBP15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 ZMIZ1Q9ULJ6 1067 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 MMP17Q9ULZ9 603 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 ZFYVE26Q68DK2 2539 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 AKAP13Q12802 2813 aa15.2■□□□□ 0.02
CHMP1A-210ENST00000551981 SPEGQ15772 3267 aa15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 K7EQS6 105 aa15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 PPP1R37O75864 691 aa15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 GARTP22102 1010 aa15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 MRPS21P82921 87 aaKnown RBP15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 LMAN2Q12907 356 aa15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 MYO1EQ12965 1108 aa15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 RABEP1Q15276 862 aa15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 MAPRE1Q15691 268 aaKnown RBP15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 L1TD1Q5T7N2 865 aaKnown RBP15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 LMBRD2Q68DH5 695 aaPredicted RBP15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 VSTM1Q6UX27 236 aa15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 TTC30AQ86WT1 665 aa15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 SYCP3Q8IZU3 236 aa15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 KDF1Q8NAX2 398 aaPredicted RBP15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 SPACA7Q96KW9 195 aa15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 SPATA17Q96L03 361 aa15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 TRPM5Q9NZQ8 1165 aa15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 MAGEC2Q9UBF1 373 aaPredicted RBP15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 CCDC39Q9UFE4 941 aa15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 PCDHB13Q9Y5F0 798 aa15.19■□□□□ 0.02
CHMP1A-210ENST00000551981 MYMKA6NI61 221 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 SLC9A3R1O14745 358 aaPredicted RBP15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 GABRDO14764 452 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 MAP3K13O43283 966 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 TMEM191BP0C7N4 346 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 BCKDHBP21953 392 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 ANXA13P27216 316 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 OPRD1P41143 372 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 DPP6P42658 865 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 GRIN1Q05586 938 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 CRY1Q16526 586 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 UAP1L1Q3KQV9 507 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 FAM171BQ6P995 826 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 LPCAT2Q7L5N7 544 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 DPH6Q7L8W6 267 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 BRAPQ7Z569 592 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 OSTM1Q86WC4 334 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 CCDC33Q8N5R6 958 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 KIAA1958Q8N8K9 716 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 MDGA1Q8NFP4 955 aa15.18■□□□□ 0.02
CHMP1A-210ENST00000551981 NOC3LQ8WTT2 800 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms