RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 KPNB1Q14974 876 aaKnown RBP14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 RASA2Q15283 850 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 XKR3Q5GH77 459 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 DENND1BQ6P3S1 775 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 DNAJC9Q8WXX5 260 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 PTCD3Q96EY7 689 aaKnown RBP14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 TMEM120AQ9BXJ8 343 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 TRIM55Q9BYV6 548 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 PORCNQ9H237 461 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 KCNK13Q9HB14 408 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 SSU72Q9NP77 194 aaKnown RBP14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 SAR1AQ9NR31 198 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 CYTH4Q9UIA0 394 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 ADGRA2Q96PE1 1338 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 E7ENQ6 273 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 LIN7AO14910 233 aaPredicted RBP14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 STAM2O75886 525 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 MT-ND3P03897 115 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 ARFIP2P53365 341 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 ZBTB16Q05516 673 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 RCN1Q15293 331 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 MUM1Q2TAK8 710 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 KLHL38Q2WGJ6 581 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 SLFN12LQ6IEE8 588 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 RINLQ6ZS11 566 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 RFX8Q6ZV50 586 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 PCGF5Q86SE9 256 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 BTBD10Q9BSF8 475 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 DCLRE1BQ9H816 532 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 NMRK1Q9NWW6 199 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 ARMCX1Q9P291 453 aa14.81□□□□□ -0.04
RAPGEF3-218ENST00000548919 EME2A4GXA9 379 aaPredicted RBP14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 MAP3K13O43283 966 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 DKC1O60832 514 aaKnown RBP eCLIP14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 FAM155BO75949 473 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 EGFRP00533 1210 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 ELK3P41970 407 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 ERFP50548 548 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 MAP3K10Q02779 954 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 FAAP100Q0VG06 881 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 PTPN20Q4JDL3 420 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 FKBP1CQ5VVH2 108 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 NSUN6Q8TEA1 469 aaKnown RBP14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 NRG4Q8WWG1 115 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 TCHPQ9BT92 498 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 PPCSQ9HAB8 311 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 SPDYE5A6NIY4 337 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 TM9SF1O15321 606 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 GYG2O15488 501 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 GSC2O15499 205 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 CCDC22O60826 627 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 SUPT20HL2P0C7V6 817 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 PYGBP11216 843 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 KRT3P12035 628 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 FSTL1Q12841 308 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 PTK7Q13308 1070 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 CCDC6Q16204 474 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 KBTBD12Q3ZCT8 623 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 SUPT20HL1Q3ZLR7 823 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 ACSBG2Q5FVE4 666 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 NPNTQ6UXI9 565 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 RFX6Q8HWS3 928 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 PDIK1LQ8N165 341 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 DTX3LQ8TDB6 740 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 WDR60Q8WVS4 1066 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 HSPH1Q92598 858 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 VPS11Q9H270 941 aa14.8□□□□□ -0.04
RAPGEF3-218ENST00000548919 E5RJQ4 531 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 LSM8O95777 96 aaKnown RBP14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 LDHAP00338 332 aaKnown RBP14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 CD19P15391 556 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 KDELR1P24390 212 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 NAMPTP43490 491 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 RAP1GAPP47736 663 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 CPA2P48052 419 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 SCYL3Q8IZE3 742 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 TEX9Q8N6V9 391 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 NIPA2Q8N8Q9 360 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 ARMC2Q8NEN0 867 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 ZNF398Q8TD17 642 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 FBXO41Q8TF61 875 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 UCMAQ8WVF2 138 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 ANKRD27Q96NW4 1050 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 SYT15Q9BQS2 421 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 PSME4Q14997 1843 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 COL11A1P12107 1806 aaPredicted RBP14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 FAM237BA0A1B0GVD1 139 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 TCRBV9S1A1TA0A576 114 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 KBTBD13C9JR72 458 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 E7ESA3 106 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 PIGRP01833 764 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 DLDP09622 509 aaKnown RBP14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 EIF3EP60228 445 aaKnown RBP14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 PPP1R2P3Q6NXS1 205 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 ZC3H18Q86VM9 953 aaKnown RBP14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 LMNTD2Q8IXW0 634 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 NSL1Q96IY1 281 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 CALN1Q9BXU9 219 aa14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 DHX33Q9H6R0 707 aaKnown RBP14.79□□□□□ -0.04
RAPGEF3-218ENST00000548919 FZD1Q9UP38 647 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms