RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 RGL1Q9NZL6 768 aa10.26□□□□□ -0.77
YBX3-211ENST00000541351 CYP8B1Q9UNU6 501 aa10.26□□□□□ -0.77
YBX3-211ENST00000541351 TNFSF13BQ9Y275 285 aa10.26□□□□□ -0.77
YBX3-211ENST00000541351 FNDC3AQ9Y2H6 1198 aaKnown RBP10.26□□□□□ -0.77
YBX3-211ENST00000541351 ANKRD17O75179 2603 aaKnown RBP10.26□□□□□ -0.77
YBX3-211ENST00000541351 AHCTF1Q8WYP5 2266 aa10.26□□□□□ -0.77
YBX3-211ENST00000541351 PTPRDP23468 1912 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 A0A0A0MRY4 1105 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 PCDHGA12O60330 932 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 RFPL3O75679 317 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 LARGE1O95461 756 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 VNN2O95498 520 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 AFPP02771 609 aaKnown RBP10.25□□□□□ -0.77
YBX3-211ENST00000541351 F11P03951 625 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 SFTPCP11686 197 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 PFKLP17858 780 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 GABRG2P18507 467 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 RARRES1P49788 294 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 DMP1Q13316 513 aaPredicted RBP10.25□□□□□ -0.77
YBX3-211ENST00000541351 ZNF568Q3ZCX4 644 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 CACTIN-AS1Q8N1I8 211 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 THEM5Q8N1Q8 247 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 ZCCHC9Q8N567 271 aaKnown RBP10.25□□□□□ -0.77
YBX3-211ENST00000541351 ZNF513Q8N8E2 541 aaPredicted RBP10.25□□□□□ -0.77
YBX3-211ENST00000541351 OXER1Q8TDS5 423 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 SNRNP27Q8WVK2 155 aaKnown RBP10.25□□□□□ -0.77
YBX3-211ENST00000541351 TTC9Q92623 222 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 ZNF578Q96N58 590 aaPredicted RBP10.25□□□□□ -0.77
YBX3-211ENST00000541351 DPH1Q9BZG8 443 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 KCNMB3Q9NPA1 279 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 DSEQ9UL01 958 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 PCDHA4Q9UN74 947 aa10.25□□□□□ -0.77
YBX3-211ENST00000541351 MYO16Q9Y6X6 1858 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 KLF18A0A0U1RQI7 1052 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 TBC1D3BA6NDS4 549 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 LAD1O00515 517 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 TERTO14746 1132 aaKnown RBP10.24□□□□□ -0.77
YBX3-211ENST00000541351 SGSM2O43147 1006 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 BRINP1O60477 761 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 SOAT2O75908 522 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 KRT38O76015 456 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 NFICP08651 508 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 ATF6P18850 670 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 CD6P30203 668 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 NTSR1P30989 418 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 KIR2DL1P43626 348 aaPredicted RBP10.24□□□□□ -0.77
YBX3-211ENST00000541351 AFF3P51826 1226 aaKnown RBP10.24□□□□□ -0.77
YBX3-211ENST00000541351 INHBCP55103 352 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 NFATC3Q12968 1075 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 TARDBPQ13148 414 aaKnown RBP eCLIP10.24□□□□□ -0.77
YBX3-211ENST00000541351 NOLC1Q14978 699 aaKnown RBP eCLIP10.24□□□□□ -0.77
YBX3-211ENST00000541351 SLC39A12Q504Y0 691 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 BTBD8Q5XKL5 378 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 EEF1DP3Q658K8 133 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 PADI6Q6TGC4 694 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 METTL23Q86XA0 190 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 SH3RF2Q8TEC5 729 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 GIPC2Q8TF65 315 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 TCHPQ9BT92 498 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 RNF26Q9BY78 433 aaPredicted RBP10.24□□□□□ -0.77
YBX3-211ENST00000541351 TRIM4Q9C037 500 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 CCDC113Q9H0I3 377 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 RPF1Q9H9Y2 349 aaKnown RBP10.24□□□□□ -0.77
YBX3-211ENST00000541351 MAGED2Q9UNF1 606 aaPredicted RBP10.24□□□□□ -0.77
YBX3-211ENST00000541351 PCDHB6Q9Y5E3 794 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 TIMM13Q9Y5L4 95 aaPredicted RBP10.24□□□□□ -0.77
YBX3-211ENST00000541351 ZNF638Q14966 1978 aaKnown RBP10.24□□□□□ -0.77
YBX3-211ENST00000541351 DOPEY1Q5JWR5 2465 aa10.24□□□□□ -0.77
YBX3-211ENST00000541351 COL5A1P20908 1838 aaPredicted RBP10.23□□□□□ -0.77
YBX3-211ENST00000541351 CEP192Q8TEP8 1941 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 E2F8A0AVK6 867 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 K7ERI5 159 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 ZBTB39O15060 712 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 EDIL3O43854 480 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 ADAM23O75077 832 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 SLITRK3O94933 977 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 MCF2P10911 925 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 CHRM1P11229 460 aaPredicted RBP10.23□□□□□ -0.77
YBX3-211ENST00000541351 NCAM1P13591 858 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 CYP3A5P20815 502 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 CDC27P30260 824 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 NMT1P30419 496 aaKnown RBP10.23□□□□□ -0.77
YBX3-211ENST00000541351 OXTRP30559 389 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 OSTNP61366 133 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 ILKQ13418 452 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 MAEAQ7L5Y9 396 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 ERICH1Q86X53 443 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 DHX40Q8IX18 779 aaKnown RBP10.23□□□□□ -0.77
YBX3-211ENST00000541351 TRIM22Q8IYM9 498 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 DCP1BQ8IZD4 617 aaKnown RBP10.23□□□□□ -0.77
YBX3-211ENST00000541351 TTC9BQ8N6N2 239 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 KCNE4Q8WWG9 221 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 IGSF8Q969P0 613 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 CCDC97Q96F63 343 aaPredicted RBP10.23□□□□□ -0.77
YBX3-211ENST00000541351 ZMAT2Q96NC0 199 aaKnown RBP10.23□□□□□ -0.77
YBX3-211ENST00000541351 TSPAN18Q96SJ8 248 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 EIF2AK1Q9BQI3 630 aaKnown RBP10.23□□□□□ -0.77
YBX3-211ENST00000541351 RWDD1Q9H446 243 aaPredicted RBP10.23□□□□□ -0.77
YBX3-211ENST00000541351 IL21RQ9HBE5 538 aa10.23□□□□□ -0.77
YBX3-211ENST00000541351 VPS54Q9P1Q0 977 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms