RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 CEP57L1Q8IYX8 460 aa22.35■■□□□ 1.17
SMPD1-204ENST00000530395 CEP295NLQ96MC4 621 aa22.35■■□□□ 1.17
SMPD1-204ENST00000530395 SNX25Q9H3E2 840 aa22.35■■□□□ 1.17
SMPD1-204ENST00000530395 EBF3Q9H4W6 596 aa22.35■■□□□ 1.17
SMPD1-204ENST00000530395 HPS4Q9NQG7 708 aa22.35■■□□□ 1.17
SMPD1-204ENST00000530395 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.34■■□□□ 1.17
SMPD1-204ENST00000530395 ATP2C2O75185 946 aa22.34■■□□□ 1.17
SMPD1-204ENST00000530395 LMO2P25791 158 aa22.34■■□□□ 1.17
SMPD1-204ENST00000530395 ANXA13P27216 316 aa22.34■■□□□ 1.17
SMPD1-204ENST00000530395 CASP1P29466 404 aa22.34■■□□□ 1.17
SMPD1-204ENST00000530395 AFMP43652 599 aa22.34■■□□□ 1.17
SMPD1-204ENST00000530395 TNNC1P63316 161 aa22.34■■□□□ 1.17
SMPD1-204ENST00000530395 CYP27A1Q02318 531 aa22.34■■□□□ 1.17
SMPD1-204ENST00000530395 FAM160A1Q05DH4 1040 aa22.34■■□□□ 1.17
SMPD1-204ENST00000530395 WDR44Q5JSH3 913 aa22.34■■□□□ 1.17
SMPD1-204ENST00000530395 TRIM68Q6AZZ1 485 aa22.34■■□□□ 1.17
SMPD1-204ENST00000530395 C12orf56Q8IXR9 622 aa22.34■■□□□ 1.17
SMPD1-204ENST00000530395 GOLGA5Q8TBA6 731 aa22.34■■□□□ 1.17
SMPD1-204ENST00000530395 EXOC4Q96A65 974 aa22.34■■□□□ 1.17
SMPD1-204ENST00000530395 SPATA17Q96L03 361 aa22.34■■□□□ 1.17
SMPD1-204ENST00000530395 SLC39A2Q9NP94 309 aa22.34■■□□□ 1.17
SMPD1-204ENST00000530395 CRTAC1Q9NQ79 661 aa22.34■■□□□ 1.17
SMPD1-204ENST00000530395 EHD2Q9NZN4 543 aa22.34■■□□□ 1.17
SMPD1-204ENST00000530395 PDGFRBP09619 1106 aa22.33■■□□□ 1.17
SMPD1-204ENST00000530395 CNR2P34972 360 aa22.33■■□□□ 1.17
SMPD1-204ENST00000530395 GRIK1P39086 918 aa22.33■■□□□ 1.17
SMPD1-204ENST00000530395 PDE6CP51160 858 aa22.33■■□□□ 1.17
SMPD1-204ENST00000530395 GRSF1Q12849 480 aaKnown RBP eCLIP22.33■■□□□ 1.17
SMPD1-204ENST00000530395 TRPC3Q13507 836 aa22.33■■□□□ 1.17
SMPD1-204ENST00000530395 CUL4BQ13620 913 aa22.33■■□□□ 1.17
SMPD1-204ENST00000530395 PUM1Q14671 1186 aaKnown RBP eCLIP22.33■■□□□ 1.17
SMPD1-204ENST00000530395 MTF1Q14872 753 aa22.33■■□□□ 1.17
SMPD1-204ENST00000530395 LAIR1Q6GTX8 287 aa22.33■■□□□ 1.17
SMPD1-204ENST00000530395 PRR23BQ6ZRT6 265 aa22.33■■□□□ 1.17
SMPD1-204ENST00000530395 LONP2Q86WA8 852 aa22.33■■□□□ 1.17
SMPD1-204ENST00000530395 CPA6Q8N4T0 437 aa22.33■■□□□ 1.17
SMPD1-204ENST00000530395 MYCBPAPQ8TBZ2 947 aa22.33■■□□□ 1.17
SMPD1-204ENST00000530395 CHURC1-FNTBB4DL54 471 aa22.32■■□□□ 1.16
SMPD1-204ENST00000530395 TRIM66O15016 1216 aa22.32■■□□□ 1.16
SMPD1-204ENST00000530395 EXOC3O60645 756 aa22.32■■□□□ 1.16
SMPD1-204ENST00000530395 TACC1O75410 805 aa22.32■■□□□ 1.16
SMPD1-204ENST00000530395 FAM163BP0C2L3 166 aa22.32■■□□□ 1.16
SMPD1-204ENST00000530395 BDNFP23560 247 aa22.32■■□□□ 1.16
SMPD1-204ENST00000530395 GNL1P36915 607 aaPredicted RBP22.32■■□□□ 1.16
SMPD1-204ENST00000530395 FNTBP49356 437 aa22.32■■□□□ 1.16
SMPD1-204ENST00000530395 KCNB1Q14721 858 aa22.32■■□□□ 1.16
SMPD1-204ENST00000530395 KNOP1Q1ED39 458 aaKnown RBP22.32■■□□□ 1.16
SMPD1-204ENST00000530395 DGLUCYQ7Z3D6 616 aa22.32■■□□□ 1.16
SMPD1-204ENST00000530395 TTC16Q8NEE8 873 aa22.32■■□□□ 1.16
SMPD1-204ENST00000530395 USP18Q9UMW8 372 aa22.32■■□□□ 1.16
SMPD1-204ENST00000530395 K7ESF4 209 aa22.31■■□□□ 1.16
SMPD1-204ENST00000530395 CST3P01034 146 aaPredicted RBP22.31■■□□□ 1.16
SMPD1-204ENST00000530395 ARSAP15289 507 aa22.31■■□□□ 1.16
SMPD1-204ENST00000530395 SDHBP21912 280 aa22.31■■□□□ 1.16
SMPD1-204ENST00000530395 IFNAR2P48551 515 aa22.31■■□□□ 1.16
SMPD1-204ENST00000530395 LMNB2Q03252 620 aa22.31■■□□□ 1.16
SMPD1-204ENST00000530395 DNM1Q05193 864 aaKnown RBP22.31■■□□□ 1.16
SMPD1-204ENST00000530395 SIM2Q14190 667 aaPredicted RBP22.31■■□□□ 1.16
SMPD1-204ENST00000530395 WDR72Q3MJ13 1102 aa22.31■■□□□ 1.16
SMPD1-204ENST00000530395 TMEM196Q5HYL7 178 aa22.31■■□□□ 1.16
SMPD1-204ENST00000530395 MDH1BQ5I0G3 518 aa22.31■■□□□ 1.16
SMPD1-204ENST00000530395 HEATR6Q6AI08 1181 aaKnown RBP22.31■■□□□ 1.16
SMPD1-204ENST00000530395 DENND5BQ6ZUT9 1274 aa22.31■■□□□ 1.16
SMPD1-204ENST00000530395 OR6B3Q8NGW1 331 aa22.31■■□□□ 1.16
SMPD1-204ENST00000530395 OSCP1Q8WVF1 389 aa22.31■■□□□ 1.16
SMPD1-204ENST00000530395 SYAP1Q96A49 352 aaPredicted RBP22.31■■□□□ 1.16
SMPD1-204ENST00000530395 PCED1BQ96HM7 432 aa22.31■■□□□ 1.16
SMPD1-204ENST00000530395 MRPL45Q9BRJ2 306 aaKnown RBP22.31■■□□□ 1.16
SMPD1-204ENST00000530395 DUS2Q9NX74 493 aaKnown RBP22.31■■□□□ 1.16
SMPD1-204ENST00000530395 TRDMT1O14717 391 aaKnown RBP22.3■■□□□ 1.16
SMPD1-204ENST00000530395 ATG13O75143 517 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 PHACTR2O75167 634 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 CLSTN1O94985 981 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 STAU1O95793 577 aaKnown RBP22.3■■□□□ 1.16
SMPD1-204ENST00000530395 SLFN14P0C7P3 912 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 ATICP31939 592 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 DMWDQ09019 674 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 USP4Q13107 963 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 PKP1Q13835 747 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 ZNF77Q15935 545 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 LPAL2Q16609 132 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 RSPO4Q2I0M5 234 aaPredicted RBP22.3■■□□□ 1.16
SMPD1-204ENST00000530395 SPRYD3Q8NCJ5 442 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 RIN3Q8TB24 985 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 ATP2A3Q93084 1043 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 SLC22A12Q96S37 553 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 CYP2S1Q96SQ9 504 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 EXOC1Q9NV70 894 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 TRPM5Q9NZQ8 1165 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 SERTAD1Q9UHV2 236 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 RCOR1Q9UKL0 485 aa22.3■■□□□ 1.16
SMPD1-204ENST00000530395 OTOL1A6NHN0 477 aaPredicted RBP22.29■■□□□ 1.16
SMPD1-204ENST00000530395 PRR5-ARHGAP8B1AHC4 643 aa22.29■■□□□ 1.16
SMPD1-204ENST00000530395 PFKLP17858 780 aa22.29■■□□□ 1.16
SMPD1-204ENST00000530395 HDCP19113 662 aa22.29■■□□□ 1.16
SMPD1-204ENST00000530395 DRD1P21728 446 aa22.29■■□□□ 1.16
SMPD1-204ENST00000530395 HOXA6P31267 233 aa22.29■■□□□ 1.16
SMPD1-204ENST00000530395 AP3M2P53677 418 aa22.29■■□□□ 1.16
SMPD1-204ENST00000530395 ARHGAP8P85298 464 aa22.29■■□□□ 1.16
SMPD1-204ENST00000530395 FSTL4Q6MZW2 842 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms