RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 E2F2Q14209 437 aa7.04□□□□□ -1.28
PCF11-202ENST00000528336 ZIK1Q3SY52 487 aaPredicted RBP7.04□□□□□ -1.28
PCF11-202ENST00000528336 ICE2Q659A1 982 aa7.04□□□□□ -1.28
PCF11-202ENST00000528336 KAZNQ674X7 775 aa7.04□□□□□ -1.28
PCF11-202ENST00000528336 SFRP4Q6FHJ7 346 aaPredicted RBP7.04□□□□□ -1.28
PCF11-202ENST00000528336 NME8Q8N427 588 aa7.04□□□□□ -1.28
PCF11-202ENST00000528336 GPR150Q8NGU9 434 aa7.04□□□□□ -1.28
PCF11-202ENST00000528336 SPSB4Q96A44 273 aa7.04□□□□□ -1.28
PCF11-202ENST00000528336 EVI5LQ96CN4 794 aa7.04□□□□□ -1.28
PCF11-202ENST00000528336 CHFRQ96EP1 664 aa7.04□□□□□ -1.28
PCF11-202ENST00000528336 MRIQ9BWK5 157 aa7.04□□□□□ -1.28
PCF11-202ENST00000528336 BTBD1Q9H0C5 482 aa7.04□□□□□ -1.28
PCF11-202ENST00000528336 TOR3AQ9H497 397 aa7.04□□□□□ -1.28
PCF11-202ENST00000528336 SSX2IPQ9Y2D8 614 aa7.04□□□□□ -1.28
PCF11-202ENST00000528336 F8W8V4 182 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 KPNA5O15131 536 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 PROM1O43490 865 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 RPL17P18621 184 aaKnown RBP7.03□□□□□ -1.28
PCF11-202ENST00000528336 LRPAP1P30533 357 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 SP2Q02086 613 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 MYO1EQ12965 1108 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 TBCCQ15814 346 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 MAP9Q49MG5 647 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 IL31Q6EBC2 164 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 GAS2L3Q86XJ1 694 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 FAM109AQ8N4B1 249 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 ACTRT2Q8TDY3 377 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 PPP2R3CQ969Q6 453 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 FKBP10Q96AY3 582 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 NAA15Q9BXJ9 866 aaKnown RBP7.03□□□□□ -1.28
PCF11-202ENST00000528336 CXorf36Q9H7Y0 433 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 SERHLQ9NQF3 203 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 DKK3Q9UBP4 350 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 PAXBP1Q9Y5B6 917 aa7.03□□□□□ -1.28
PCF11-202ENST00000528336 ADGRA2Q96PE1 1338 aa7.02□□□□□ -1.28
PCF11-202ENST00000528336 MBD3L4A6NDZ8 208 aaPredicted RBP7.02□□□□□ -1.29
PCF11-202ENST00000528336 MBD3L3A6NE82 208 aaPredicted RBP7.02□□□□□ -1.29
PCF11-202ENST00000528336 VWC2LB2RUY7 222 aa7.02□□□□□ -1.29
PCF11-202ENST00000528336 ADM5C9JUS6 153 aa7.02□□□□□ -1.29
PCF11-202ENST00000528336 MPPED1O15442 326 aa7.02□□□□□ -1.29
PCF11-202ENST00000528336 KLRC1P26715 233 aa7.02□□□□□ -1.29
PCF11-202ENST00000528336 PPIFP30405 207 aaKnown RBP7.02□□□□□ -1.29
PCF11-202ENST00000528336 DGKEP52429 567 aa7.02□□□□□ -1.29
PCF11-202ENST00000528336 PRKAG1P54619 331 aa7.02□□□□□ -1.29
PCF11-202ENST00000528336 UNC13DQ70J99 1090 aa7.02□□□□□ -1.29
PCF11-202ENST00000528336 BPIFB1Q8TDL5 484 aa7.02□□□□□ -1.29
PCF11-202ENST00000528336 PARD3BQ8TEW8 1205 aa7.02□□□□□ -1.29
PCF11-202ENST00000528336 STRBPQ96SI9 672 aaKnown RBP7.02□□□□□ -1.29
PCF11-202ENST00000528336 KLC4Q9NSK0 619 aa7.02□□□□□ -1.29
PCF11-202ENST00000528336 LAS1LQ9Y4W2 734 aaKnown RBP7.02□□□□□ -1.29
PCF11-202ENST00000528336 DMRT1Q9Y5R6 373 aa7.02□□□□□ -1.29
PCF11-202ENST00000528336 H7C4K7 107 aa7.01□□□□□ -1.29
PCF11-202ENST00000528336 RAB27BO00194 218 aa7.01□□□□□ -1.29
PCF11-202ENST00000528336 RHOBTB3O94955 611 aa7.01□□□□□ -1.29
PCF11-202ENST00000528336 PHKG2P15735 406 aa7.01□□□□□ -1.29
PCF11-202ENST00000528336 PROZP22891 400 aa7.01□□□□□ -1.29
PCF11-202ENST00000528336 CXCR5P32302 372 aa7.01□□□□□ -1.29
PCF11-202ENST00000528336 ITGA8P53708 1063 aa7.01□□□□□ -1.29
PCF11-202ENST00000528336 PTPRRQ15256 657 aa7.01□□□□□ -1.29
PCF11-202ENST00000528336 PTCHD3Q3KNS1 767 aa7.01□□□□□ -1.29
PCF11-202ENST00000528336 KCTD20Q7Z5Y7 419 aa7.01□□□□□ -1.29
PCF11-202ENST00000528336 LIX1LQ8IVB5 337 aa7.01□□□□□ -1.29
PCF11-202ENST00000528336 SLC15A3Q8IY34 581 aa7.01□□□□□ -1.29
PCF11-202ENST00000528336 CCDC146Q8IYE0 955 aa7.01□□□□□ -1.29
PCF11-202ENST00000528336 PPP1R9BQ96SB3 815 aa7.01□□□□□ -1.29
PCF11-202ENST00000528336 UNKQ9C0B0 810 aaKnown RBP7.01□□□□□ -1.29
PCF11-202ENST00000528336 MAF1Q9H063 256 aa7.01□□□□□ -1.29
PCF11-202ENST00000528336 CHST8Q9H2A9 424 aa7.01□□□□□ -1.29
PCF11-202ENST00000528336 PNPLA8Q9NP80 782 aa7.01□□□□□ -1.29
PCF11-202ENST00000528336 TOP2AP11388 1531 aaKnown RBP7.01□□□□□ -1.29
PCF11-202ENST00000528336 ANO9A1A5B4 782 aa7□□□□□ -1.29
PCF11-202ENST00000528336 RASAL1O95294 804 aa7□□□□□ -1.29
PCF11-202ENST00000528336 ERBB2P04626 1255 aa7□□□□□ -1.29
PCF11-202ENST00000528336 NR2F6P10588 404 aa7□□□□□ -1.29
PCF11-202ENST00000528336 IL1R1P14778 569 aa7□□□□□ -1.29
PCF11-202ENST00000528336 KCNA3P22001 575 aa7□□□□□ -1.29
PCF11-202ENST00000528336 ADORA2AP29274 412 aa7□□□□□ -1.29
PCF11-202ENST00000528336 PRIM2P49643 509 aa7□□□□□ -1.29
PCF11-202ENST00000528336 NEK3P51956 506 aa7□□□□□ -1.29
PCF11-202ENST00000528336 HMGA2P52926 109 aa7□□□□□ -1.29
PCF11-202ENST00000528336 ZNF543Q08ER8 600 aa7□□□□□ -1.29
PCF11-202ENST00000528336 IFIT5Q13325 482 aaKnown RBP7□□□□□ -1.29
PCF11-202ENST00000528336 PICALMQ13492 652 aa7□□□□□ -1.29
PCF11-202ENST00000528336 ZNF169Q14929 603 aaPredicted RBP7□□□□□ -1.29
PCF11-202ENST00000528336 TXNRD1Q16881 649 aa7□□□□□ -1.29
PCF11-202ENST00000528336 C4orf46Q504U0 113 aa7□□□□□ -1.29
PCF11-202ENST00000528336 DEPDC1Q5TB30 811 aa7□□□□□ -1.29
PCF11-202ENST00000528336 CACHD1Q5VU97 1274 aa7□□□□□ -1.29
PCF11-202ENST00000528336 CCSAPQ6IQ19 270 aaPredicted RBP7□□□□□ -1.29
PCF11-202ENST00000528336 PEG10Q86TG7 708 aaKnown RBP7□□□□□ -1.29
PCF11-202ENST00000528336 CCDC33Q8N5R6 958 aa7□□□□□ -1.29
PCF11-202ENST00000528336 ATG4AQ8WYN0 398 aa7□□□□□ -1.29
PCF11-202ENST00000528336 MSLNLQ96KJ4 702 aa7□□□□□ -1.29
PCF11-202ENST00000528336 SNX22Q96L94 193 aa7□□□□□ -1.29
PCF11-202ENST00000528336 TBC1D23Q9NUY8 699 aa7□□□□□ -1.29
PCF11-202ENST00000528336 WDR33Q9C0J8 1336 aaKnown RBP7□□□□□ -1.29
PCF11-202ENST00000528336 LOC102723971A0A1B0GUV8 181 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 POM121BA6NF01 834 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 IL18RAPO95256 599 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 MT-ND5P03915 603 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms