RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 KCND2Q9NZV8 630 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 HSFX1Q9UBD0 423 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 ZMIZ1Q9ULJ6 1067 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 SMC3Q9UQE7 1217 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 DERAQ9Y315 318 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 C2CD2Q9Y426 696 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 CLIC4Q9Y696 253 aa7.06□□□□□ -1.28
CD44-221ENST00000526000 CITO14578 2027 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 CHD8Q9HCK8 2581 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 CCDC163A0A0D9SF12 145 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 K7EQS6 105 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 KHNYNO15037 678 aaKnown RBP7.05□□□□□ -1.28
CD44-221ENST00000526000 FOXD2O60548 495 aaPredicted RBP7.05□□□□□ -1.28
CD44-221ENST00000526000 KLF8O95600 359 aaPredicted RBP7.05□□□□□ -1.28
CD44-221ENST00000526000 PROS1P07225 676 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 DDX6P26196 483 aaKnown RBP eCLIP7.05□□□□□ -1.28
CD44-221ENST00000526000 ANP32AP39687 249 aaKnown RBP7.05□□□□□ -1.28
CD44-221ENST00000526000 OPRD1P41143 372 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 ZXDBP98169 803 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 MYL7Q01449 175 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 CYP27A1Q02318 531 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 SMARCB1Q12824 385 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 CUL4AQ13619 759 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 COL9A2Q14055 689 aaPredicted RBP7.05□□□□□ -1.28
CD44-221ENST00000526000 KCNB1Q14721 858 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 POSTNQ15063 836 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 ZNF77Q15935 545 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 NFE2Q16621 373 aaPredicted RBP7.05□□□□□ -1.28
CD44-221ENST00000526000 INTS6LQ5JSJ4 861 aaKnown RBP7.05□□□□□ -1.28
CD44-221ENST00000526000 DAB2IPQ5VWQ8 1189 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 ARL6IP4Q66PJ3 421 aaKnown RBP7.05□□□□□ -1.28
CD44-221ENST00000526000 TMEM92Q6UXU6 159 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 SYT13Q7L8C5 426 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 HS2ST1Q7LGA3 356 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 CYP2U1Q7Z449 544 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 ADGRF2Q8IZF7 708 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 ALLCQ8N6M5 410 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 NAT16Q8N8M0 369 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 RDH13Q8NBN7 331 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 TXNDC5Q8NBS9 432 aaKnown RBP7.05□□□□□ -1.28
CD44-221ENST00000526000 OR5B17Q8NGF7 314 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 USP33Q8TEY7 942 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 CACTINQ8WUQ7 758 aaKnown RBP7.05□□□□□ -1.28
CD44-221ENST00000526000 HPS3Q969F9 1004 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 ELMO3Q96BJ8 720 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 ACCSQ96QU6 501 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 MMS19Q96T76 1030 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 ACBD6Q9BR61 282 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 CBWD1Q9BRT8 395 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 FGFBP2Q9BYJ0 223 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 RNF38Q9H0F5 515 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 KIF9Q9HAQ2 790 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 GCNT4Q9P109 453 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 MAGEC2Q9UBF1 373 aaPredicted RBP7.05□□□□□ -1.28
CD44-221ENST00000526000 CHORDC1Q9UHD1 332 aaPredicted RBP7.05□□□□□ -1.28
CD44-221ENST00000526000 R3HCC1Q9Y3T6 440 aaKnown RBP7.05□□□□□ -1.28
CD44-221ENST00000526000 PCDHGA5Q9Y5G8 931 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 STYXL1Q9Y6J8 313 aa7.05□□□□□ -1.28
CD44-221ENST00000526000 ATXN2Q99700 1313 aaKnown RBP7.04□□□□□ -1.28
CD44-221ENST00000526000 FRYLO94915 3013 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.04□□□□□ -1.28
CD44-221ENST00000526000 SPAARA0A1B0GVQ0 90 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 LNP1A1A4G5 178 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 VPS37CA5D8V6 355 aaPredicted RBP7.04□□□□□ -1.28
CD44-221ENST00000526000 SGK1O00141 431 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 LEFTY2O00292 366 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 CLDN5O00501 218 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 CDX4O14627 284 aaPredicted RBP7.04□□□□□ -1.28
CD44-221ENST00000526000 HYAL3O43820 417 aaPredicted RBP7.04□□□□□ -1.28
CD44-221ENST00000526000 NOL4O94818 638 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 IL18RAPO95256 599 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 TMEM191BP0C7N4 346 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 PDCP20941 246 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 PAX3P23760 479 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 PTGER3P43115 390 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 CASP5P51878 434 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 RBP5P82980 135 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 KDSRQ06136 332 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 SOWAHAQ2M3V2 549 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 FBXO43Q4G163 708 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 RRAGBQ5VZM2 374 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 UNQ6494/PRO21346Q6UXR6 183 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 SV2BQ7L1I2 683 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 FILIP1Q7Z7B0 1213 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 C12orf40Q86WS4 652 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 BRSK2Q8IWQ3 736 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 FSIP1Q8NA03 581 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 SPRYD3Q8NCJ5 442 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 GLIS3Q8NEA6 775 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 OR2I1PQ8NGU4 316 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 HMGB4Q8WW32 186 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 ATP2A3Q93084 1043 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 MYLPFQ96A32 169 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 EXOC4Q96A65 974 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 ACDQ96AP0 544 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 HPDLQ96IR7 371 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 AK8Q96MA6 479 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 ZNF560Q96MR9 790 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 SYT15Q9BQS2 421 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 SCNM1Q9BWG6 230 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms