RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 WNT6Q9Y6F9 365 aa21.72■■□□□ 1.07
PABPC1-217ENST00000521067 ACACBO00763 2458 aa21.71■■□□□ 1.07
PABPC1-217ENST00000521067 KIAA0391O15091 583 aaKnown RBP21.71■■□□□ 1.07
PABPC1-217ENST00000521067 SPTLC2O15270 562 aa21.71■■□□□ 1.07
PABPC1-217ENST00000521067 BDNFP23560 247 aa21.71■■□□□ 1.07
PABPC1-217ENST00000521067 MAGEA11P43364 429 aa21.71■■□□□ 1.07
PABPC1-217ENST00000521067 USP46P62068 366 aa21.71■■□□□ 1.07
PABPC1-217ENST00000521067 MYO1EQ12965 1108 aa21.71■■□□□ 1.07
PABPC1-217ENST00000521067 PDGFRLQ15198 375 aa21.71■■□□□ 1.07
PABPC1-217ENST00000521067 SHC4Q6S5L8 630 aa21.71■■□□□ 1.07
PABPC1-217ENST00000521067 TRAPPC11Q7Z392 1133 aa21.71■■□□□ 1.07
PABPC1-217ENST00000521067 RDH13Q8NBN7 331 aa21.71■■□□□ 1.07
PABPC1-217ENST00000521067 TTC16Q8NEE8 873 aa21.71■■□□□ 1.07
PABPC1-217ENST00000521067 ZNF507Q8TCN5 953 aa21.71■■□□□ 1.07
PABPC1-217ENST00000521067 OSCP1Q8WVF1 389 aa21.71■■□□□ 1.07
PABPC1-217ENST00000521067 MYLPFQ96A32 169 aa21.71■■□□□ 1.07
PABPC1-217ENST00000521067 DUS2Q9NX74 493 aaKnown RBP21.71■■□□□ 1.07
PABPC1-217ENST00000521067 CDH9Q9ULB4 789 aa21.71■■□□□ 1.07
PABPC1-217ENST00000521067 TRAV19A0A0A6YYK7 116 aa21.7■■□□□ 1.06
PABPC1-217ENST00000521067 AXIN1O15169 862 aa21.7■■□□□ 1.06
PABPC1-217ENST00000521067 TNNC2P02585 160 aa21.7■■□□□ 1.06
PABPC1-217ENST00000521067 CKMP06732 381 aa21.7■■□□□ 1.06
PABPC1-217ENST00000521067 USP17L7P0C7H9 530 aa21.7■■□□□ 1.06
PABPC1-217ENST00000521067 EML3Q32P44 896 aa21.7■■□□□ 1.06
PABPC1-217ENST00000521067 SH3RF2Q8TEC5 729 aa21.7■■□□□ 1.06
PABPC1-217ENST00000521067 DHX58Q96C10 678 aa21.7■■□□□ 1.06
PABPC1-217ENST00000521067 P2RY13Q9BPV8 354 aa21.7■■□□□ 1.06
PABPC1-217ENST00000521067 MRPL45Q9BRJ2 306 aaKnown RBP21.7■■□□□ 1.06
PABPC1-217ENST00000521067 GZF1Q9H116 711 aaPredicted RBP21.7■■□□□ 1.06
PABPC1-217ENST00000521067 MAGEC2Q9UBF1 373 aaPredicted RBP21.7■■□□□ 1.06
PABPC1-217ENST00000521067 OBSL1O75147 1896 aa21.7■■□□□ 1.06
PABPC1-217ENST00000521067 CCDC163A0A0D9SF12 145 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 SLC30A4O14863 429 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 CLIC2O15247 247 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 PPP6R2O75170 966 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 DRD1P21728 446 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 WARSP23381 471 aaKnown RBP21.69■■□□□ 1.06
PABPC1-217ENST00000521067 CASP1P29466 404 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 USP4Q13107 963 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 SURF1Q15526 300 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 CCDC6Q16204 474 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 CNNM4Q6P4Q7 775 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 KBTBD6Q86V97 674 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 WDR49Q8IV35 697 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 NETO1Q8TDF5 533 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 GAB3Q8WWW8 586 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 ZNF516Q92618 1163 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 SPATA17Q96L03 361 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 MMS19Q96T76 1030 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 AGPAT3Q9NRZ7 376 aa21.69■■□□□ 1.06
PABPC1-217ENST00000521067 CNOT1A5YKK6 2376 aaKnown RBP21.68■■□□□ 1.06
PABPC1-217ENST00000521067 ANTXRLA6NF34 631 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 K7ELQ4 463 aaPredicted RBP21.68■■□□□ 1.06
PABPC1-217ENST00000521067 EIF3DO15371 548 aaKnown RBP eCLIP21.68■■□□□ 1.06
PABPC1-217ENST00000521067 ATG13O75143 517 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 RPP40O75818 363 aaKnown RBP21.68■■□□□ 1.06
PABPC1-217ENST00000521067 HDCP19113 662 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 RAP1GAPP47736 663 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 ASIC1P78348 528 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 AMPD2Q01433 879 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 EHHADHQ08426 723 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 SNRNP35Q16560 246 aaKnown RBP21.68■■□□□ 1.06
PABPC1-217ENST00000521067 VSTM1Q6UX27 236 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 C4orf50Q6ZRC1 276 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 STXBP4Q6ZWJ1 553 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 SCFD1Q8WVM8 642 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 PCED1BQ96HM7 432 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 CNTNAP3BQ96NU0 1288 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 C7orf25Q9BPX7 421 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 BACH2Q9BYV9 841 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 CNTNAP3Q9BZ76 1288 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 LRRC27Q9C0I9 530 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 ARRDC1-AS1Q9H2J1 176 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 KIAA1586Q9HCI6 787 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 RXFP3Q9NSD7 469 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 TMEM30AQ9NV96 361 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 SLC8A2Q9UPR5 921 aa21.68■■□□□ 1.06
PABPC1-217ENST00000521067 R3HCC1Q9Y3T6 440 aaKnown RBP21.68■■□□□ 1.06
PABPC1-217ENST00000521067 ZNF638Q14966 1978 aaKnown RBP21.67■■□□□ 1.06
PABPC1-217ENST00000521067 DLATP10515 647 aaKnown RBP21.67■■□□□ 1.06
PABPC1-217ENST00000521067 GRIK1P39086 918 aa21.67■■□□□ 1.06
PABPC1-217ENST00000521067 CACNA2D1P54289 1103 aa21.67■■□□□ 1.06
PABPC1-217ENST00000521067 CYP27A1Q02318 531 aa21.67■■□□□ 1.06
PABPC1-217ENST00000521067 SF3A2Q15428 464 aaKnown RBP21.67■■□□□ 1.06
PABPC1-217ENST00000521067 FAM26FQ5R3K3 315 aa21.67■■□□□ 1.06
PABPC1-217ENST00000521067 FOXD4L5Q5VV16 416 aaPredicted RBP21.67■■□□□ 1.06
PABPC1-217ENST00000521067 NELFCDQ8IXH7 590 aa21.67■■□□□ 1.06
PABPC1-217ENST00000521067 CPA6Q8N4T0 437 aa21.67■■□□□ 1.06
PABPC1-217ENST00000521067 RPLP0P6Q8NHW5 317 aa21.67■■□□□ 1.06
PABPC1-217ENST00000521067 MYCBPAPQ8TBZ2 947 aa21.67■■□□□ 1.06
PABPC1-217ENST00000521067 FOXD4L4Q8WXT5 416 aaPredicted RBP21.67■■□□□ 1.06
PABPC1-217ENST00000521067 HHIPQ96QV1 700 aa21.67■■□□□ 1.06
PABPC1-217ENST00000521067 RNF38Q9H0F5 515 aa21.67■■□□□ 1.06
PABPC1-217ENST00000521067 CUEDC2Q9H467 287 aa21.67■■□□□ 1.06
PABPC1-217ENST00000521067 ARHGAP26Q9UNA1 814 aa21.67■■□□□ 1.06
PABPC1-217ENST00000521067 CUTAO60888 179 aa21.66■■□□□ 1.06
PABPC1-217ENST00000521067 TCF3P15923 654 aa21.66■■□□□ 1.06
PABPC1-217ENST00000521067 GNL1P36915 607 aaPredicted RBP21.66■■□□□ 1.06
PABPC1-217ENST00000521067 IFNAR2P48551 515 aa21.66■■□□□ 1.06
PABPC1-217ENST00000521067 CYP2J2P51589 502 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms