RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 GPC5P78333 572 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 FAM189BP81408 668 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 LETM2Q2VYF4 491 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 SYDE2Q5VT97 1194 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 DCLRE1AQ6PJP8 1040 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 TMED8Q6PL24 325 aaPredicted RBP4.45□□□□□ -1.7
VPS13B-208ENST00000521037 CRIP3Q6Q6R5 217 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 KCTD1Q719H9 257 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 CHST3Q7LGC8 479 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 JAMLQ86YT9 394 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 SLC39A11Q8N1S5 342 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 ZNF843Q8N446 348 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 CELF5Q8N6W0 485 aaKnown RBP4.45□□□□□ -1.7
VPS13B-208ENST00000521037 ZSWIM2Q8NEG5 633 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 DNERQ8NFT8 737 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 SMARCC2Q8TAQ2 1214 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 ADAMTS17Q8TE56 1095 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 LMBR1Q8WVP7 490 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 ATRIPQ8WXE1 791 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 AUTS2Q8WXX7 1259 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 CASD1Q96PB1 797 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 TAAR1Q96RJ0 339 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 CEP89Q96ST8 783 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 RHOBTB2Q9BYZ6 727 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 CRNKL1Q9BZJ0 848 aaKnown RBP4.45□□□□□ -1.7
VPS13B-208ENST00000521037 ZBP1Q9H171 429 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 SMOC1Q9H4F8 434 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 LTB4R2Q9NPC1 389 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 NGRNQ9NPE2 291 aaKnown RBP4.45□□□□□ -1.7
VPS13B-208ENST00000521037 ST7Q9NRC1 585 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 ATP8A2Q9NTI2 1148 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 GEMIN8Q9NWZ8 242 aaKnown RBP4.45□□□□□ -1.7
VPS13B-208ENST00000521037 NTMQ9P121 344 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 DBR1Q9UK59 544 aaKnown RBP4.45□□□□□ -1.7
VPS13B-208ENST00000521037 NEUROG3Q9Y4Z2 214 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 FRMPD2Q68DX3 1309 aaPredicted RBP4.45□□□□□ -1.7
VPS13B-208ENST00000521037 NRCAMQ92823 1304 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 RAD50Q92878 1312 aa4.45□□□□□ -1.7
VPS13B-208ENST00000521037 MYH4Q9Y623 1939 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 FSD2A1L4K1 749 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 C17orf102A2RUQ5 167 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 GSG1L2A8MUP6 293 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 FOXP2O15409 715 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 LAMTOR5O43504 91 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 MBD4O95243 580 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 GJB6O95452 261 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 LGALS2P05162 132 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 ZNF806P0C7X5 589 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 C6P13671 934 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 MCCP23508 829 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 TACR1P25103 407 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 CALML3P27482 149 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 MCM4P33991 863 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 RPS9P46781 194 aaKnown RBP4.44□□□□□ -1.7
VPS13B-208ENST00000521037 STAT2P52630 851 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 HMGA2P52926 109 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 TBX4P57082 545 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 EXOSC10Q01780 885 aaKnown RBP4.44□□□□□ -1.7
VPS13B-208ENST00000521037 LONRF2Q1L5Z9 754 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 SBK1Q52WX2 424 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 BRDTQ58F21 947 aaPredicted RBP4.44□□□□□ -1.7
VPS13B-208ENST00000521037 ZC3H12BQ5HYM0 836 aaKnown RBP4.44□□□□□ -1.7
VPS13B-208ENST00000521037 ATAT1Q5SQI0 421 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 TTC39AQ5SRH9 613 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 CELF3Q5SZQ8 465 aaKnown RBP4.44□□□□□ -1.7
VPS13B-208ENST00000521037 SLC9C2Q5TAH2 1124 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 FBXW10Q5XX13 1052 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 CES5AQ6NT32 575 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 GK5Q6ZS86 529 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 TSHZ1Q6ZSZ6 1077 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 SEPT14Q6ZU15 432 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 OTOP3Q7RTS5 596 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 SPRED1Q7Z699 444 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 FAM160B2Q86V87 743 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 NAT16Q8N8M0 369 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 IL31RAQ8NI17 732 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 ALG3Q92685 438 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 FGF14Q92915 247 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 DVL3Q92997 716 aaPredicted RBP4.44□□□□□ -1.7
VPS13B-208ENST00000521037 CHMP4CQ96CF2 233 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 LOXL4Q96JB6 756 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 CCDC136Q96JN2 1154 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 CCDC8Q9H0W5 538 aaPredicted RBP4.44□□□□□ -1.7
VPS13B-208ENST00000521037 RXFP1Q9HBX9 757 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 WDR6Q9NNW5 1121 aaKnown RBP4.44□□□□□ -1.7
VPS13B-208ENST00000521037 ANKFY1Q9P2R3 1169 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 ADD3Q9UEY8 706 aaKnown RBP4.44□□□□□ -1.7
VPS13B-208ENST00000521037 CCPG1Q9ULG6 757 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 PADI3Q9ULW8 664 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 G3BP2Q9UN86 482 aaKnown RBP4.44□□□□□ -1.7
VPS13B-208ENST00000521037 KIAA1217Q5T5P2 1943 aa4.44□□□□□ -1.7
VPS13B-208ENST00000521037 SPTA1P02549 2419 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 MYH7BA7E2Y1 1941 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 GREB1Q4ZG55 1949 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 MIA3Q5JRA6 1907 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 CDX4O14627 284 aaPredicted RBP4.43□□□□□ -1.7
VPS13B-208ENST00000521037 ARHGAP6O43182 974 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 NMT2O60551 498 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 PRDM1O75626 825 aa4.43□□□□□ -1.7
VPS13B-208ENST00000521037 ASMTLO95671 621 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms