RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 ASCC2Q9H1I8 757 aaPredicted RBP13.53□□□□□ -0.24
PHF3-212ENST00000515594 SLC9A2Q9UBY0 812 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 HMGXB4Q9UGU5 601 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 NR2E3Q9Y5X4 410 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 TCRBV5S1A1TA0A578 114 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 KBTBD13C9JR72 458 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 VWA5AO00534 786 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 LPXNO60711 386 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 ZC3H11AO75152 810 aaKnown RBP eCLIP13.53□□□□□ -0.24
PHF3-212ENST00000515594 HAUS5O94927 633 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 POTEJP0CG39 1038 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 AMPD1P23109 780 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 MARK3P27448 753 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 YWHAGP61981 247 aaKnown RBP eCLIP13.53□□□□□ -0.24
PHF3-212ENST00000515594 RCN2Q14257 317 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 CCDC142Q17RM4 750 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 TDRPQ86YL5 185 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 SLC25A41Q8N5S1 370 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 ZNF483Q8TF39 744 aaPredicted RBP13.53□□□□□ -0.24
PHF3-212ENST00000515594 RSAD2Q8WXG1 361 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 TTC25Q96NG3 672 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 DDX50Q9BQ39 737 aaKnown RBP13.53□□□□□ -0.24
PHF3-212ENST00000515594 PPP1R12CQ9BZL4 782 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 DEFB129Q9H1M3 183 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 PCDH9Q9HC56 1237 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 BATF3Q9NR55 127 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 DLGAP2Q9P1A6 1054 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 FER1L6Q2WGJ9 1857 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 BRCA2P51587 3418 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 C2CD2LO14523 706 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 CAPN9O14815 690 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 PLA2G6O60733 806 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 MYL2P10916 166 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 PTK7Q13308 1070 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 CDO1Q16878 200 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 FYB2Q5VWT5 728 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 TMEM154Q6P9G4 183 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 RFX6Q8HWS3 928 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 CTAGE3PQ8IX95 158 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 TTLL6Q8N841 843 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 NAT8LQ8N9F0 302 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 BANPQ8N9N5 519 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 DNAJC9Q8WXX5 260 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 INPP5DQ92835 1189 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 PPP1R16BQ96T49 567 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 GMLQ99445 158 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 SLC13A1Q9BZW2 595 aa13.53□□□□□ -0.24
PHF3-212ENST00000515594 MGAMO43451 1857 aa13.52□□□□□ -0.24
PHF3-212ENST00000515594 TCRBV9S1A1TA0A576 114 aa13.52□□□□□ -0.24
PHF3-212ENST00000515594 CXorf49A8MYA2 514 aaPredicted RBP13.52□□□□□ -0.24
PHF3-212ENST00000515594 WDR46O15213 610 aaKnown RBP13.52□□□□□ -0.24
PHF3-212ENST00000515594 GYG2O15488 501 aa13.52□□□□□ -0.24
PHF3-212ENST00000515594 TBX10O75333 385 aa13.52□□□□□ -0.24
PHF3-212ENST00000515594 SRGAP2CP0DJJ0 459 aa13.52□□□□□ -0.24
PHF3-212ENST00000515594 GMPRP36959 345 aa13.52□□□□□ -0.24
PHF3-212ENST00000515594 CLDN10P78369 228 aa13.52□□□□□ -0.24
PHF3-212ENST00000515594 ZCCHC23Q6ZST2 131 aa13.52□□□□□ -0.24
PHF3-212ENST00000515594 KBTBD2Q8IY47 623 aa13.52□□□□□ -0.24
PHF3-212ENST00000515594 MCPH1Q8NEM0 835 aa13.52□□□□□ -0.24
PHF3-212ENST00000515594 PIWIL1Q96J94 861 aaKnown RBP13.52□□□□□ -0.24
PHF3-212ENST00000515594 ACAP3Q96P50 834 aa13.52□□□□□ -0.24
PHF3-212ENST00000515594 TIPINQ9BVW5 301 aa13.52□□□□□ -0.24
PHF3-212ENST00000515594 TAS2R1Q9NYW7 299 aa13.52□□□□□ -0.24
PHF3-212ENST00000515594 SYNPO2Q9UMS6 1093 aa13.52□□□□□ -0.24
PHF3-212ENST00000515594 SHOC2Q9UQ13 582 aa13.52□□□□□ -0.24
PHF3-212ENST00000515594 LRRC42Q9Y546 428 aa13.52□□□□□ -0.24
PHF3-212ENST00000515594 COL11A1P12107 1806 aaPredicted RBP13.52□□□□□ -0.25
PHF3-212ENST00000515594 A6NHS1 94 aa13.52□□□□□ -0.25
PHF3-212ENST00000515594 ATP2A1O14983 1001 aa13.52□□□□□ -0.25
PHF3-212ENST00000515594 PLSCR1O15162 318 aa13.52□□□□□ -0.25
PHF3-212ENST00000515594 PSAPP07602 524 aa13.52□□□□□ -0.25
PHF3-212ENST00000515594 KRT19P08727 400 aa13.52□□□□□ -0.25
PHF3-212ENST00000515594 TROVE2P10155 538 aaKnown RBP eCLIP13.52□□□□□ -0.25
PHF3-212ENST00000515594 CHRM1P11229 460 aaPredicted RBP13.52□□□□□ -0.25
PHF3-212ENST00000515594 ARFIP2P53365 341 aa13.52□□□□□ -0.25
PHF3-212ENST00000515594 ARL4CP56559 192 aa13.52□□□□□ -0.25
PHF3-212ENST00000515594 LMNB2Q03252 620 aa13.52□□□□□ -0.25
PHF3-212ENST00000515594 SLC45A4Q5BKX6 768 aa13.52□□□□□ -0.25
PHF3-212ENST00000515594 SNX30Q5VWJ9 437 aa13.52□□□□□ -0.25
PHF3-212ENST00000515594 TMEM192Q8IY95 271 aa13.52□□□□□ -0.25
PHF3-212ENST00000515594 THNSL1Q8IYQ7 743 aa13.52□□□□□ -0.25
PHF3-212ENST00000515594 ATP11CQ8NB49 1132 aa13.52□□□□□ -0.25
PHF3-212ENST00000515594 NETO2Q8NC67 525 aa13.52□□□□□ -0.25
PHF3-212ENST00000515594 SNCAIPQ9Y6H5 919 aa13.52□□□□□ -0.25
PHF3-212ENST00000515594 BRWD3Q6RI45 1802 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 GSC2O15499 205 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 ONECUT3O60422 494 aaPredicted RBP13.51□□□□□ -0.25
PHF3-212ENST00000515594 WFS1O76024 890 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 MT-ND3P03897 115 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 ENO1P06733 434 aaKnown RBP13.51□□□□□ -0.25
PHF3-212ENST00000515594 ITGAVP06756 1048 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 CCND2P30279 289 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 SLC25A11Q02978 314 aaKnown RBP13.51□□□□□ -0.25
PHF3-212ENST00000515594 GRIK3Q13003 919 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 SGSM1Q2NKQ1 1148 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 C1orf228Q6PIY5 440 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 TRIM50Q86XT4 487 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 PPIL6Q8IXY8 311 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 LRRC71Q8N4P6 559 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 NKD2Q969F2 451 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms