RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 ZUFSPQ96AP4 578 aa7.57□□□□□ -1.2
NIPBL-208ENST00000514335 TRIM43Q96BQ3 446 aaPredicted RBP7.57□□□□□ -1.2
NIPBL-208ENST00000514335 CFAP57Q96MR6 1250 aa7.57□□□□□ -1.2
NIPBL-208ENST00000514335 FTOQ9C0B1 505 aaKnown RBP eCLIP7.57□□□□□ -1.2
NIPBL-208ENST00000514335 SLC12A5Q9H2X9 1139 aa7.57□□□□□ -1.2
NIPBL-208ENST00000514335 PALMDQ9NP74 551 aa7.57□□□□□ -1.2
NIPBL-208ENST00000514335 FAIMQ9NVQ4 179 aa7.57□□□□□ -1.2
NIPBL-208ENST00000514335 HAUS2Q9NVX0 235 aa7.57□□□□□ -1.2
NIPBL-208ENST00000514335 AKAP7Q9P0M2 348 aaPredicted RBP7.57□□□□□ -1.2
NIPBL-208ENST00000514335 REV1Q9UBZ9 1251 aa7.57□□□□□ -1.2
NIPBL-208ENST00000514335 LRFN2Q9ULH4 789 aa7.57□□□□□ -1.2
NIPBL-208ENST00000514335 HCN4Q9Y3Q4 1203 aa7.57□□□□□ -1.2
NIPBL-208ENST00000514335 NFE2L3Q9Y4A8 694 aa7.57□□□□□ -1.2
NIPBL-208ENST00000514335 EMILIN1Q9Y6C2 1016 aa7.57□□□□□ -1.2
NIPBL-208ENST00000514335 ADAMTS7Q9UKP4 1686 aa7.57□□□□□ -1.2
NIPBL-208ENST00000514335 LTN1O94822 1766 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 HEATR9A2RTY3 570 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 USP27XA6NNY8 438 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 MATN2O00339 956 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 SYNCRIPO60506 623 aaKnown RBP7.56□□□□□ -1.2
NIPBL-208ENST00000514335 KERAO60938 352 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 S100A9P06702 114 aaKnown RBP7.56□□□□□ -1.2
NIPBL-208ENST00000514335 M6PRP20645 277 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 OSBPP22059 807 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 CPA2P48052 419 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 HSPA13P48723 471 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 ADAM17P78536 824 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 FKBP4Q02790 459 aaKnown RBP eCLIP7.56□□□□□ -1.2
NIPBL-208ENST00000514335 PIN1Q13526 163 aaPredicted RBP7.56□□□□□ -1.2
NIPBL-208ENST00000514335 DSG2Q14126 1118 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 TMEM266Q2M3C6 531 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 KRTCAP3Q53RY4 240 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 SGO1Q5FBB7 561 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 KCTD20Q7Z5Y7 419 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 TCP11L2Q8N4U5 519 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 MFSD2AQ8NA29 543 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 ZNF579Q8NAF0 562 aaKnown RBP7.56□□□□□ -1.2
NIPBL-208ENST00000514335 C3orf58Q8NDZ4 430 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 DDHD1Q8NEL9 900 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 OR56B2PQ8NGI1 322 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 FAM71BQ8TC56 605 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 ZNF507Q8TCN5 953 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 DNAJC7Q99615 494 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 TM9SF2Q99805 663 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 TCF25Q9BQ70 676 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 STN1Q9H668 368 aaKnown RBP7.56□□□□□ -1.2
NIPBL-208ENST00000514335 TOPORSQ9NS56 1045 aaPredicted RBP7.56□□□□□ -1.2
NIPBL-208ENST00000514335 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.56□□□□□ -1.2
NIPBL-208ENST00000514335 CYB5R1Q9UHQ9 305 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 ATP6V1HQ9UI12 483 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 SLC39A10Q9ULF5 831 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 PHTF1Q9UMS5 762 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 PLAAQ9Y263 795 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 USP6P35125 1406 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 LAMB1P07942 1786 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 IRAK2O43187 625 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 MAP2P11137 1827 aaKnown RBP7.56□□□□□ -1.2
NIPBL-208ENST00000514335 RAG1P15918 1043 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 ARFIP2P53365 341 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 PTPN21Q16825 1174 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 SMU1Q2TAY7 513 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 FAM171BQ6P995 826 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 CRELD2Q6UXH1 353 aaPredicted RBP7.56□□□□□ -1.2
NIPBL-208ENST00000514335 MACC1Q6ZN28 852 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 LHFPL2Q6ZUX7 228 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 MOSPD2Q8NHP6 518 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 HUS1BQ8NHY5 278 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 NCSTNQ92542 709 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 MTMR8Q96EF0 704 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 ART5Q96L15 291 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 ESYT1Q9BSJ8 1104 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 SP110Q9HB58 689 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 DTLQ9NZJ0 730 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 NOP53Q9NZM5 478 aaKnown RBP7.56□□□□□ -1.2
NIPBL-208ENST00000514335 TBC1D14Q9P2M4 693 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 BAIAP2L1Q9UHR4 511 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 GMEB2Q9UKD1 530 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 FAF1Q9UNN5 650 aaPredicted RBP7.56□□□□□ -1.2
NIPBL-208ENST00000514335 NSFL1CQ9UNZ2 370 aaKnown RBP7.56□□□□□ -1.2
NIPBL-208ENST00000514335 SMG5Q9UPR3 1016 aaKnown RBP7.56□□□□□ -1.2
NIPBL-208ENST00000514335 MAPRE3Q9UPY8 281 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 CAB39Q9Y376 341 aaPredicted RBP7.56□□□□□ -1.2
NIPBL-208ENST00000514335 STARD13Q9Y3M8 1113 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 NUMBLQ9Y6R0 609 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 UBR3Q6ZT12 1888 aa7.56□□□□□ -1.2
NIPBL-208ENST00000514335 KDM6AO15550 1401 aaPredicted RBP7.55□□□□□ -1.2
NIPBL-208ENST00000514335 FAM83GA6ND36 823 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ATP6V1G2-DDX39BF2Z307 99 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ADCY3O60266 1144 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 PALMO75781 387 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ZBTB11O95625 1053 aaPredicted RBP7.55□□□□□ -1.2
NIPBL-208ENST00000514335 CYP11A1P05108 521 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 RB1P06400 928 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 CAPN1P07384 714 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 STAT1P42224 750 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 SLC1A1P43005 524 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 GALK1P51570 392 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 GSDMDP57764 484 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 FAM102BQ5T8I3 360 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 KRT74Q7RTS7 529 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms