RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 MT-CO3P00414 261 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 CD99P14209 185 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 GCFC2P16383 781 aaKnown RBP6.93□□□□□ -1.3
CLDND1-225ENST00000512147 KCNA2P16389 499 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 MCM7P33993 719 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 SLC26A2P50443 739 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 SEC13P55735 322 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 DNM1Q05193 864 aaKnown RBP6.93□□□□□ -1.3
CLDND1-225ENST00000512147 CLN3Q13286 438 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 ITGB3BPQ13352 177 aaPredicted RBP6.93□□□□□ -1.3
CLDND1-225ENST00000512147 ILKQ13418 452 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 MTMR1Q13613 665 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 MORC3Q14149 939 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 CLCA4Q14CN2 919 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 FAM171A1Q5VUB5 890 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 HS6ST3Q8IZP7 471 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 ETNPPLQ8TBG4 499 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 EZH1Q92800 747 aaPredicted RBP6.93□□□□□ -1.3
CLDND1-225ENST00000512147 HAS1Q92839 578 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 GJA10Q969M2 543 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 CDHR1Q96JP9 859 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 CNDP2Q96KP4 475 aaKnown RBP6.93□□□□□ -1.3
CLDND1-225ENST00000512147 MTMR9Q96QG7 549 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 USP28Q96RU2 1077 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 MAP7D2Q96T17 732 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 NAP1L4Q99733 375 aaKnown RBP6.93□□□□□ -1.3
CLDND1-225ENST00000512147 MIR1-1HGQ9H1L0 117 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 TMEM60Q9H2L4 133 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 EBF3Q9H4W6 596 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 AGO4Q9HCK5 861 aaKnown RBP6.93□□□□□ -1.3
CLDND1-225ENST00000512147 KCNMB3Q9NPA1 279 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 ASAH2Q9NR71 780 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 ATXN7L1Q9ULK2 861 aaPredicted RBP6.93□□□□□ -1.3
CLDND1-225ENST00000512147 ENTPD4Q9Y227 616 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 PCDHB2Q9Y5E7 798 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 PCDHB1Q9Y5F3 818 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 MN1Q10571 1320 aaPredicted RBP6.93□□□□□ -1.3
CLDND1-225ENST00000512147 COL1A2P08123 1366 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 EVPLQ92817 2033 aa6.93□□□□□ -1.3
CLDND1-225ENST00000512147 ESPL1Q14674 2120 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 PLXND1Q9Y4D7 1925 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 OTOL1A6NHN0 477 aaPredicted RBP6.92□□□□□ -1.3
CLDND1-225ENST00000512147 KIAA1324LA8MWY0 1029 aaPredicted RBP6.92□□□□□ -1.3
CLDND1-225ENST00000512147 IPO5O00410 1097 aaKnown RBP6.92□□□□□ -1.3
CLDND1-225ENST00000512147 DHX15O43143 795 aaKnown RBP6.92□□□□□ -1.3
CLDND1-225ENST00000512147 NEMFO60524 1076 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 USP12O75317 370 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 C4BPAP04003 597 aaKnown RBP6.92□□□□□ -1.3
CLDND1-225ENST00000512147 CD1EP15812 388 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 TMOD1P28289 359 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 NASPP49321 788 aaPredicted RBP6.92□□□□□ -1.3
CLDND1-225ENST00000512147 ACADVLP49748 655 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 CCT8P50990 548 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 SETQ01105 290 aaPredicted RBP6.92□□□□□ -1.3
CLDND1-225ENST00000512147 CEBPZQ03701 1054 aaKnown RBP6.92□□□□□ -1.3
CLDND1-225ENST00000512147 DSC1Q08554 894 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 KCNAB2Q13303 367 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 ORC2Q13416 577 aaPredicted RBP6.92□□□□□ -1.3
CLDND1-225ENST00000512147 IL17AQ16552 155 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 CALCRLQ16602 461 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 ATL3Q6DD88 541 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 SV2AQ7L0J3 742 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 ZCCHC9Q8N567 271 aaKnown RBP6.92□□□□□ -1.3
CLDND1-225ENST00000512147 EFCAB3Q8N7B9 438 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 ZSCAN1Q8NBB4 408 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 LRRN4CLQ8ND94 238 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 RFFLQ8WZ73 363 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 SLC5A5Q92911 643 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 ZNF396Q96N95 335 aaPredicted RBP6.92□□□□□ -1.3
CLDND1-225ENST00000512147 FAM83CQ9BQN1 747 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 ZNF577Q9BSK1 485 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 UBN1Q9NPG3 1134 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 PKD2L1Q9P0L9 805 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 ADAMTS1Q9UHI8 967 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 PIN4Q9Y237 131 aaKnown RBP6.92□□□□□ -1.3
CLDND1-225ENST00000512147 ATP6V1DQ9Y5K8 247 aa6.92□□□□□ -1.3
CLDND1-225ENST00000512147 IGHV1OR15-9A0A0B4J2B8 117 aa6.91□□□□□ -1.3
CLDND1-225ENST00000512147 TCRBV21S2A2A0A5A6 115 aa6.91□□□□□ -1.3
CLDND1-225ENST00000512147 E2F8A0AVK6 867 aa6.91□□□□□ -1.3
CLDND1-225ENST00000512147 MEI4A8MW99 385 aa6.91□□□□□ -1.3
CLDND1-225ENST00000512147 TBX3O15119 743 aa6.91□□□□□ -1.3
CLDND1-225ENST00000512147 BCAT2O15382 392 aaPredicted RBP6.91□□□□□ -1.3
CLDND1-225ENST00000512147 ZBTB24O43167 697 aaPredicted RBP6.91□□□□□ -1.3
CLDND1-225ENST00000512147 ZNF217O75362 1048 aa6.91□□□□□ -1.3
CLDND1-225ENST00000512147 PSMD10O75832 226 aa6.91□□□□□ -1.3
CLDND1-225ENST00000512147 BAG4O95429 457 aaKnown RBP6.91□□□□□ -1.3
CLDND1-225ENST00000512147 OR52Z1P0C646 297 aa6.91□□□□□ -1.3
CLDND1-225ENST00000512147 HNRNPLP14866 589 aaKnown RBP eCLIP6.91□□□□□ -1.3
CLDND1-225ENST00000512147 TXKP42681 527 aa6.91□□□□□ -1.3
CLDND1-225ENST00000512147 MLLT10P55197 1068 aa6.91□□□□□ -1.3
CLDND1-225ENST00000512147 SKOR1P84550 965 aa6.91□□□□□ -1.3
CLDND1-225ENST00000512147 ATP2C1P98194 919 aaPredicted RBP6.91□□□□□ -1.3
CLDND1-225ENST00000512147 INSM1Q01101 510 aaPredicted RBP6.91□□□□□ -1.3
CLDND1-225ENST00000512147 BNC1Q01954 994 aa6.91□□□□□ -1.3
CLDND1-225ENST00000512147 SLC39A14Q15043 492 aa6.91□□□□□ -1.3
CLDND1-225ENST00000512147 NAIF1Q69YI7 327 aaPredicted RBP6.91□□□□□ -1.3
CLDND1-225ENST00000512147 B3GNT9Q6UX72 402 aa6.91□□□□□ -1.3
CLDND1-225ENST00000512147 LINC00301Q8NCQ3 95 aa6.91□□□□□ -1.3
CLDND1-225ENST00000512147 ZNF461Q8TAF7 563 aa6.91□□□□□ -1.3
CLDND1-225ENST00000512147 SHKBP1Q8TBC3 707 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms