RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 TRAPPC8Q9Y2L5 1435 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 FSD2A1L4K1 749 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 PI4KAP2A4QPH2 592 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 MYO1CO00159 1063 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 TRIM38O00635 465 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 PRAMEF4O60810 478 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 DKC1O60832 514 aaKnown RBP eCLIP2.52□□□□□ -2.01
PDE4D-218ENST00000509368 GFPT2O94808 682 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 SYN1P17600 705 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 VIPR1P32241 457 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 NR1H2P55055 460 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 CUL4AQ13619 759 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 NFIXQ14938 502 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 TAF11Q15544 211 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 ACAD10Q6JQN1 1059 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 NFRKBQ6P4R8 1299 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 ABHD15Q6UXT9 468 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 TMTC3Q6ZXV5 915 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 REXO1L1PQ8IX06 675 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 TRMT2AQ8IZ69 625 aaKnown RBP2.52□□□□□ -2.01
PDE4D-218ENST00000509368 SH2D3CQ8N5H7 860 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 WDR60Q8WVS4 1066 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 KCNN1Q92952 543 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 SLC7A6OSQ96CW6 309 aaPredicted RBP2.52□□□□□ -2.01
PDE4D-218ENST00000509368 NAP1L5Q96NT1 182 aaPredicted RBP2.52□□□□□ -2.01
PDE4D-218ENST00000509368 KCNC2Q96PR1 638 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 ASB2Q96Q27 587 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 PACSIN1Q9BY11 444 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 AGXT2Q9BYV1 514 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 CPEB1Q9BZB8 566 aaKnown RBP2.52□□□□□ -2.01
PDE4D-218ENST00000509368 RNPEPQ9H4A4 650 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 SH3GLB2Q9NR46 395 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 KCND1Q9NSA2 647 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 RXFP3Q9NSD7 469 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 PLA2G3Q9NZ20 509 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 AASSQ9UDR5 926 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 NCOA1Q15788 1441 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 HMCN1Q96RW7 5635 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 LOC102723971A0A1B0GUV8 181 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 CCDC78A2IDD5 438 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 B4DLN1 442 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 GUCY1B2O75343 617 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 TSPAN9O75954 239 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 KLHL18O94889 574 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 AMHP03971 560 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 TNNT1P13805 278 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 TGM1P22735 817 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 ALDH18A1P54886 795 aaKnown RBP2.52□□□□□ -2.01
PDE4D-218ENST00000509368 CASP6P55212 293 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 RNASE9P60153 205 aaKnown RBP2.52□□□□□ -2.01
PDE4D-218ENST00000509368 CD83Q01151 205 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 CTBP1Q13363 440 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 ATP1A4Q13733 1029 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 ARHGEF7Q14155 803 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 EIF4A2Q14240 407 aaKnown RBP2.52□□□□□ -2.01
PDE4D-218ENST00000509368 RAB3GAP1Q15042 981 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 KCNMB1Q16558 191 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 TRIM68Q6AZZ1 485 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 SULT6B1Q6IMI4 303 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 ANO7Q6IWH7 933 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 GGT6Q6P531 493 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 INO80CQ6PI98 192 aaPredicted RBP2.52□□□□□ -2.01
PDE4D-218ENST00000509368 ZC3H14Q6PJT7 736 aaKnown RBP2.52□□□□□ -2.01
PDE4D-218ENST00000509368 LRRC8DQ7L1W4 858 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 RASGRP2Q7LDG7 609 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 PRPF39Q86UA1 669 aaKnown RBP2.52□□□□□ -2.01
PDE4D-218ENST00000509368 TTC30AQ86WT1 665 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 ARMC8Q8IUR7 673 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 TMEM57Q8N5G2 664 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 TTLL6Q8N841 843 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 STYXQ8WUJ0 223 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 ST8SIA4Q92187 359 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 HVCN1Q96D96 273 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 FAM227BQ96M60 508 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 CLIC6Q96NY7 704 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 BAG1Q99933 345 aaPredicted RBP2.52□□□□□ -2.01
PDE4D-218ENST00000509368 SPATA5L1Q9BVQ7 753 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 PRDM13Q9H4Q3 707 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 GCM1Q9NP62 436 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 DKK4Q9UBT3 224 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 CFDP1Q9UEE9 299 aaPredicted RBP2.52□□□□□ -2.01
PDE4D-218ENST00000509368 CLCA2Q9UQC9 943 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 INO80Q9ULG1 1556 aaPredicted RBP2.52□□□□□ -2.01
PDE4D-218ENST00000509368 MED14O60244 1454 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 ZNF518AQ6AHZ1 1483 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 PLCH2O75038 1416 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 NCOA3Q9Y6Q9 1424 aa2.52□□□□□ -2.01
PDE4D-218ENST00000509368 MYO3AQ8NEV4 1616 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ADAMTS20P59510 1910 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 H0Y858 1186 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 SUV39H1O43463 412 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 RTN3O95197 1032 aaPredicted RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 JUNP05412 331 aaKnown RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 HNRNPCP07910 306 aaKnown RBP eCLIP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 GLI1P08151 1106 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 PFKLP17858 780 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ADSLP30566 484 aaPredicted RBP2.51□□□□□ -2.01
PDE4D-218ENST00000509368 ETV4P43268 484 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 GPD2P43304 727 aa2.51□□□□□ -2.01
PDE4D-218ENST00000509368 LIMS1P48059 325 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms