RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 PRR12Q9ULL5 1215 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 PCDHB4Q9Y5E5 795 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 UMODL1Q5DID0 1318 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 COPEO14579 308 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 PRPF4O43172 522 aaKnown RBP eCLIP7.97□□□□□ -1.13
NEDD9-208ENST00000504387 CSDE1O75534 798 aaKnown RBP7.97□□□□□ -1.13
NEDD9-208ENST00000504387 VCLP18206 1134 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 CHRNA5P30532 468 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 ELK3P41970 407 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 CCNG2Q16589 344 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 BMT2Q1RMZ1 405 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 CLEC16AQ2KHT3 1053 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 APOBEC3HQ6NTF7 200 aaKnown RBP7.97□□□□□ -1.13
NEDD9-208ENST00000504387 RNF111Q6ZNA4 994 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.97□□□□□ -1.13
NEDD9-208ENST00000504387 RAB3IL1Q8TBN0 382 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 ATXN7L3BQ96GX2 97 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 ANKRD27Q96NW4 1050 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 CALN1Q9BXU9 219 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 ARHGEF4Q9NR80 690 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 EURLQ9NYK6 297 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 IL1RAPL1Q9NZN1 696 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 LARSQ9P2J5 1176 aaKnown RBP7.97□□□□□ -1.13
NEDD9-208ENST00000504387 MAD1L1Q9Y6D9 718 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 CNTNAP4Q9C0A0 1308 aa7.97□□□□□ -1.13
NEDD9-208ENST00000504387 MAGEB2O15479 319 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 LIASO43766 372 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 STAMBPO95630 424 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 ITGA2BP08514 1039 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 CD48P09326 243 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 GZMAP12544 262 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 RAG1P15918 1043 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 KLRC2P26717 231 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 RPL10P27635 214 aaKnown RBP7.96□□□□□ -1.13
NEDD9-208ENST00000504387 PCSK6P29122 969 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 PSMD7P51665 324 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 CCR3P51677 355 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 STAT2P52630 851 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 CAV1Q03135 178 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 R3HDM1Q15032 1099 aaKnown RBP7.96□□□□□ -1.13
NEDD9-208ENST00000504387 PDK3Q15120 406 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 XKR9Q5GH70 373 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 CES4AQ5XG92 561 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 SCARA5Q6ZMJ2 495 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 TRIM67Q6ZTA4 783 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 NUDCD3Q8IVD9 361 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 ARHGAP24Q8N264 748 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 EMC1Q8N766 993 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 C12orf50Q8NA57 414 aaPredicted RBP7.96□□□□□ -1.13
NEDD9-208ENST00000504387 ADAM32Q8TC27 787 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 HELQQ8TDG4 1101 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 HSPH1Q92598 858 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 FAM81BQ96LP2 452 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 COA1Q9GZY4 146 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 CYLDQ9NQC7 956 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 DMAC2Q9NW81 257 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 XPO7Q9UIA9 1087 aaKnown RBP7.96□□□□□ -1.13
NEDD9-208ENST00000504387 NR2E3Q9Y5X4 410 aa7.96□□□□□ -1.13
NEDD9-208ENST00000504387 KBTBD13C9JR72 458 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 hCG_1984214I3L0E3 225 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 ADCY3O60266 1144 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 CST8O60676 142 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 MMP10P09238 476 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 IL1R1P14778 569 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 PMLP29590 882 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 MAPK10P53779 464 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 OTUD4Q01804 1114 aaKnown RBP7.96□□□□□ -1.14
NEDD9-208ENST00000504387 HIC1Q14526 733 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 TAF5Q15542 800 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 TMCO4Q5TGY1 634 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 KRT39Q6A163 491 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 FBXL19Q6PCT2 694 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 NPNTQ6UXI9 565 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 UNC45BQ8IWX7 931 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 TMEM130Q8N3G9 435 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 ZNF713Q8N859 430 aaPredicted RBP7.96□□□□□ -1.14
NEDD9-208ENST00000504387 ARL10Q8N8L6 244 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 ACTL9Q8TC94 416 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 MIPOL1Q8TD10 442 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 MKL1Q969V6 931 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 SKA1Q96BD8 255 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 PGBD4Q96DM1 585 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 ZNF668Q96K58 619 aaPredicted RBP7.96□□□□□ -1.14
NEDD9-208ENST00000504387 TTC25Q96NG3 672 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 NACC1Q96RE7 527 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 SRPK1Q96SB4 655 aaKnown RBP7.96□□□□□ -1.14
NEDD9-208ENST00000504387 MTO1Q9Y2Z2 717 aaKnown RBP7.96□□□□□ -1.14
NEDD9-208ENST00000504387 ITGB4P16144 1822 aa7.96□□□□□ -1.14
NEDD9-208ENST00000504387 CXorf49A8MYA2 514 aaPredicted RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 IPO5O00410 1097 aaKnown RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 ABLIM1O14639 778 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 EIF3DO15371 548 aaKnown RBP eCLIP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 ZSCAN9O15535 394 aaPredicted RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 TBC1D12O60347 775 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 TMEM63AO94886 807 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 JAG1P78504 1218 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 FOLH1Q04609 750 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 LSAMPQ13449 338 aa7.95□□□□□ -1.14
NEDD9-208ENST00000504387 HSF5Q4G112 596 aaPredicted RBP7.95□□□□□ -1.14
NEDD9-208ENST00000504387 FOXR2Q6PJQ5 311 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms