RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CYP2J2P51589 502 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 GRSF1Q12849 480 aaKnown RBP eCLIP12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 CCINQ13939 588 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 GAS6Q14393 721 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 PDGFRLQ15198 375 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 LAIR1Q6GTX8 287 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 FAM171BQ6P995 826 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 VSTM1Q6UX27 236 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 PRR23BQ6ZRT6 265 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 Q6ZS52 159 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 TRAPPC11Q7Z392 1133 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 NELFCDQ8IXH7 590 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 XXYLT1Q8NBI6 393 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 CEP295NLQ96MC4 621 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 FAM83CQ9BQN1 747 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 SNX25Q9H3E2 840 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 EBF3Q9H4W6 596 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 EHD2Q9NZN4 543 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 CGNQ9P2M7 1197 aaKnown RBP12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 CCL26Q9Y258 94 aa12.58□□□□□ -0.4
NUDCD3-211ENST00000497978 KIF26AQ9ULI4 1882 aaPredicted RBP12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 SPTBN4Q9H254 2564 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 PVALEFA0A1B0GWK0 134 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 CHURC1-FNTBB4DL54 471 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 TGFB1I1O43294 461 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 HCRTO43612 131 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 ATG13O75143 517 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 ATP2C2O75185 946 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 CKMP06732 381 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 PDGFRBP09619 1106 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 FAM163BP0C2L3 166 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 LMO2P25791 158 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 GNL1P36915 607 aaPredicted RBP12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 GRIK1P39086 918 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 FNTBP49356 437 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 PDE6CP51160 858 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 PSMC1P62191 440 aaKnown RBP12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 TNNC1P63316 161 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 CYP27A1Q02318 531 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 FAM160A1Q05DH4 1040 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 CYP24A1Q07973 514 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 TRPC3Q13507 836 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 SIM2Q14190 667 aaPredicted RBP12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 KCNB1Q14721 858 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 PSMD6Q15008 389 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 TRIM68Q6AZZ1 485 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 LIMS2Q7Z4I7 341 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 LONP2Q86WA8 852 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 CEP57L1Q8IYX8 460 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 CPA6Q8N4T0 437 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 TTC16Q8NEE8 873 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 SCFD1Q8WVM8 642 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 KBTBD7Q8WVZ9 684 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 MYLPFQ96A32 169 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 CCDC127Q96BQ5 260 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 SPATA17Q96L03 361 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 CGRRF1Q99675 332 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 BLZF1Q9H2G9 400 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 SLC39A2Q9NP94 309 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 HPS4Q9NQG7 708 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 USP18Q9UMW8 372 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 PCDHA7Q9UN72 937 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 WDR87Q6ZQQ6 2873 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 OBSL1O75147 1896 aa12.57□□□□□ -0.4
NUDCD3-211ENST00000497978 PRR5-ARHGAP8B1AHC4 643 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 TRDMT1O14717 391 aaKnown RBP12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 TRIM66O15016 1216 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 PHACTR2O75167 634 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 TADA3O75528 432 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 BDNFP23560 247 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 HOXA6P31267 233 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 AFMP43652 599 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 IFNAR2P48551 515 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 ARHGAP8P85298 464 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 LMNB2Q03252 620 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 EHHADHQ08426 723 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 MTF1Q14872 753 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 LPAL2Q16609 132 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 CCDC142Q17RM4 750 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 KNOP1Q1ED39 458 aaKnown RBP12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 RSPO4Q2I0M5 234 aaPredicted RBP12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 WDR72Q3MJ13 1102 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 TMEM196Q5HYL7 178 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 WDR44Q5JSH3 913 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 RESP18Q5W5W9 173 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 HEATR6Q6AI08 1181 aaKnown RBP12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 C12orf56Q8IXR9 622 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 OR6B3Q8NGW1 331 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 GOLGA5Q8TBA6 731 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 MYCBPAPQ8TBZ2 947 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 KCNV2Q8TDN2 545 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 ATP2A3Q93084 1043 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 CRTAC1Q9NQ79 661 aa12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 DUS2Q9NX74 493 aaKnown RBP12.56□□□□□ -0.4
NUDCD3-211ENST00000497978 K7ESF4 209 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 EXOC3O60645 756 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 TACC1O75410 805 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 CLSTN1O94985 981 aa12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 CST3P01034 146 aaPredicted RBP12.55□□□□□ -0.4
NUDCD3-211ENST00000497978 RETP07949 1114 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms