RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 ZNF699Q32M78 642 aa15.21■□□□□ 0.03
RPRD1B-206ENST00000495457 WDR44Q5JSH3 913 aa15.21■□□□□ 0.03
RPRD1B-206ENST00000495457 C1orf220Q5T0J3 134 aa15.21■□□□□ 0.03
RPRD1B-206ENST00000495457 TSSK4Q6SA08 328 aa15.21■□□□□ 0.03
RPRD1B-206ENST00000495457 VSTM1Q6UX27 236 aa15.21■□□□□ 0.03
RPRD1B-206ENST00000495457 SCARA5Q6ZMJ2 495 aa15.21■□□□□ 0.03
RPRD1B-206ENST00000495457 CCDC47Q96A33 483 aaKnown RBP15.21■□□□□ 0.03
RPRD1B-206ENST00000495457 SLC22A12Q96S37 553 aa15.21■□□□□ 0.03
RPRD1B-206ENST00000495457 VRTNQ9H8Y1 702 aa15.21■□□□□ 0.03
RPRD1B-206ENST00000495457 TRPC7Q9HCX4 862 aa15.21■□□□□ 0.03
RPRD1B-206ENST00000495457 TDP1Q9NUW8 608 aa15.21■□□□□ 0.03
RPRD1B-206ENST00000495457 UXTQ9UBK9 157 aaPredicted RBP15.21■□□□□ 0.03
RPRD1B-206ENST00000495457 ZMYM5Q9UJ78 669 aa15.21■□□□□ 0.03
RPRD1B-206ENST00000495457 TRAF3IP3Q9Y228 551 aa15.21■□□□□ 0.03
RPRD1B-206ENST00000495457 VPS13AQ96RL7 3174 aa15.21■□□□□ 0.03
RPRD1B-206ENST00000495457 TICRRQ7Z2Z1 1910 aa15.21■□□□□ 0.02
RPRD1B-206ENST00000495457 F8VP50 259 aa15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 SPECC1L-ADORA2AF8WAN1 911 aa15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 FAM163BP0C2L3 166 aa15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 CHRNB1P11230 501 aa15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 PTPN1P18031 435 aaKnown RBP15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 CTHP32929 405 aa15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 CACNA2D1P54289 1103 aa15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 MLLT6P55198 1093 aaPredicted RBP15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 TRIM68Q6AZZ1 485 aa15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 SMYD4Q8IYR2 804 aaPredicted RBP15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 SPATA17Q96L03 361 aa15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 CYP2S1Q96SQ9 504 aa15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 ZNF518BQ9C0D4 1074 aa15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 SDCBP2Q9H190 292 aa15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 CHRDQ9H2X0 955 aa15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 C8orf33Q9H7E9 229 aaPredicted RBP15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 GKN1Q9NS71 199 aa15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 RBM12Q9NTZ6 932 aaKnown RBP15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 TMEM30AQ9NV96 361 aa15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 FBXO4Q9UKT5 387 aa15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 FRMD4BQ9Y2L6 1034 aa15.2■□□□□ 0.02
RPRD1B-206ENST00000495457 F5P12259 2224 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 C2orf78A6NCI8 922 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 CLDN5O00501 218 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 AKAP3O75969 853 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 NR2F2P24468 414 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 PLCB2Q00722 1185 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 PNOCQ13519 176 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 GAS6Q14393 721 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 KCNB1Q14721 858 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 ZACNQ401N2 412 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 ZNF667Q5HYK9 610 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 DENND5BQ6ZUT9 1274 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 SV2AQ7L0J3 742 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 ADSSL1Q8N142 457 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 GUF1Q8N442 669 aaKnown RBP15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 ARL14EPQ8N8R7 260 aaPredicted RBP15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 B3GALNT2Q8NCR0 500 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 TTC16Q8NEE8 873 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 TMC2Q8TDI7 906 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 MSANTD3Q96H12 275 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 FAM83CQ9BQN1 747 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 B3GNT5Q9BYG0 378 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 EBF3Q9H4W6 596 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 HPS4Q9NQG7 708 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.19■□□□□ 0.022e-6■■■■■ 96.1
RPRD1B-206ENST00000495457 THG1LQ9NWX6 298 aaKnown RBP15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 MIA3Q5JRA6 1907 aa15.19■□□□□ 0.02
RPRD1B-206ENST00000495457 NUP210Q8TEM1 1887 aaPredicted RBP15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 OTOL1A6NHN0 477 aaPredicted RBP15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 SOBPA7XYQ1 873 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 TRIM66O15016 1216 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 KIF20AO95235 890 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 CKMP06732 381 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 TRIM49P0CI25 452 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 TRIM49CP0CI26 452 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 ANXA13P27216 316 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 VAMP7P51809 220 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 NUCB2P80303 420 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 FAM160A1Q05DH4 1040 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 PON2Q15165 354 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 NFIL3Q16649 462 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 ZNF528Q3MIS6 628 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 SPOPLQ6IQ16 392 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 ZC3H14Q6PJT7 736 aaKnown RBP15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 RALGPS2Q86X27 583 aaPredicted RBP15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 FMR1NBQ8N0W7 255 aaPredicted RBP15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 C8orf48Q96LL4 319 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 ELOVL4Q9GZR5 314 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 KIF9Q9HAQ2 790 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 PRMT8Q9NR22 394 aaPredicted RBP15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 GCNT4Q9P109 453 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 CACNA1IQ9P0X4 2223 aa15.18■□□□□ 0.02
RPRD1B-206ENST00000495457 TRAV19A0A0A6YYK7 116 aa15.17■□□□□ 0.02
RPRD1B-206ENST00000495457 IKBKBO14920 756 aa15.17■□□□□ 0.02
RPRD1B-206ENST00000495457 LMNAP02545 664 aaKnown RBP15.17■□□□□ 0.02
RPRD1B-206ENST00000495457 USP17L7P0C7H9 530 aa15.17■□□□□ 0.02
RPRD1B-206ENST00000495457 ARSAP15289 507 aa15.17■□□□□ 0.02
RPRD1B-206ENST00000495457 GCLMP48507 274 aa15.17■□□□□ 0.02
RPRD1B-206ENST00000495457 PPP3CAQ08209 521 aa15.17■□□□□ 0.02
RPRD1B-206ENST00000495457 ORC1Q13415 861 aa15.17■□□□□ 0.02
RPRD1B-206ENST00000495457 RUNX3Q13761 415 aa15.17■□□□□ 0.02
RPRD1B-206ENST00000495457 ZNF268Q14587 947 aaPredicted RBP15.17■□□□□ 0.02
RPRD1B-206ENST00000495457 MTF1Q14872 753 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms