RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 LCORLQ8N3X6 602 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 CEP70Q8NHQ1 597 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 SH3RF3Q8TEJ3 882 aaPredicted RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 USP33Q8TEY7 942 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 ZNF597Q96LX8 424 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 GRIP2Q9C0E4 1043 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 RABGEF1Q9UJ41 708 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 PRPF19Q9UMS4 504 aaKnown RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 SHOC2Q9UQ13 582 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 LOC105371267A0A1B0GV96 52 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 PRSS51A0A1B0GVH4 220 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 H3BSA7 217 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 GPR25O00155 361 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 SNAP91O60641 907 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 FARP2O94887 1054 aaPredicted RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 PHKG2P15735 406 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 M6PRP20645 277 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 ENDOUP21128 410 aaKnown RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 GABRB3P28472 473 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 GNL1P36915 607 aaPredicted RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 IL6STP40189 918 aaPredicted RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 PPARDQ03181 441 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 SF3A3Q12874 501 aaKnown RBP eCLIP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 NCOA4Q13772 614 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 MORF4L2Q15014 288 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 SUZ12Q15022 739 aaKnown RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 SPTY2D1Q68D10 685 aaPredicted RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 C16orf87Q6PH81 154 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 NEK8Q86SG6 692 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 MMAAQ8IVH4 418 aaKnown RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 PRR11Q96HE9 360 aaPredicted RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 CCDC138Q96M89 665 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 UHRF1Q96T88 793 aaPredicted RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 RIOK1Q9BRS2 568 aaKnown RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 RAB34Q9BZG1 259 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 C10orf88Q9H8K7 445 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 RIC8BQ9NVN3 520 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 SIRPGQ9P1W8 387 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 SUCOQ9UBS9 1254 aaKnown RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 NAV1Q8NEY1 1877 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 NPHP3-ACAD11A0A0J9YXS1 232 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 EXOC1LA0A1B0GW35 172 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 ANKRD34BA5PLL1 514 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 DNALI1O14645 258 aaPredicted RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 SLC22A2O15244 555 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 SIN3BO75182 1162 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 MTRF1O75570 445 aaKnown RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 USP1O94782 785 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 KLHL2O95198 593 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 H6PDO95479 791 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 HSPA8P11142 646 aaKnown RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 CA4P22748 312 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 COPB2P35606 906 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 PUM3Q15397 648 aaKnown RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 NANOGP8Q6NSW7 305 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 ZNF280CQ8ND82 737 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 OR7G1Q8NGA0 311 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 PPP4R1Q8TF05 950 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 APOPT1Q96IL0 206 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 RMDN3Q96TC7 470 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 THAP2Q9H0W7 228 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 ARMT1Q9H993 441 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 LRRC4BQ9NT99 713 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 THG1LQ9NWX6 298 aaKnown RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 TSC22D4Q9Y3Q8 395 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 AP4B1Q9Y6B7 739 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 K7EPI3 171 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 ACOX3O15254 700 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 ATMINO43313 823 aaPredicted RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 CALUO43852 315 aaPredicted RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 MYL6BP14649 208 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 HOXD11P31277 338 aaPredicted RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 PSMD8P48556 350 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 NOVP48745 357 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 CSE1LP55060 971 aaKnown RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 TUBA1BP68363 451 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 C19orf57Q0VDD7 668 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 KLHL38Q2WGJ6 581 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 PUS10Q3MIT2 529 aaKnown RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 RARS2Q5T160 578 aaKnown RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 ZNF280DQ6N043 979 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 TUBA1AQ71U36 451 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 SPERTQ8NA61 448 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 ZBTB38Q8NAP3 1195 aaPredicted RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 NGDNQ8NEJ9 315 aaKnown RBP5.01□□□□□ -1.61
PRKD3-210ENST00000494667 ISOC1Q96CN7 298 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 YME1L1Q96TA2 773 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 AGPAT1Q99943 283 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 NUF2Q9BZD4 464 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 ACSS3Q9H6R3 686 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 C12orf10Q9HB07 376 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 PNPLA8Q9NP80 782 aa5.01□□□□□ -1.61
PRKD3-210ENST00000494667 ZNF804BA4D1E1 1349 aa5□□□□□ -1.61
PRKD3-210ENST00000494667 TCRBV7S2A1N4TA0A589 114 aa5□□□□□ -1.61
PRKD3-210ENST00000494667 KPNA4O00629 521 aaPredicted RBP5□□□□□ -1.61
PRKD3-210ENST00000494667 NTRK1P04629 796 aa5□□□□□ -1.61
PRKD3-210ENST00000494667 C6orf222P0C671 652 aaPredicted RBP5□□□□□ -1.61
PRKD3-210ENST00000494667 SRGAP2BP0DMP2 458 aa5□□□□□ -1.61
PRKD3-210ENST00000494667 ACTN1P12814 892 aa5□□□□□ -1.61
PRKD3-210ENST00000494667 COMTP21964 271 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms