RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 TMEM175Q9BSA9 504 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 ZBP1Q9H171 429 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 C2orf40Q9H1Z8 148 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 S1PR5Q9H228 398 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 NXF3Q9H4D5 531 aaKnown RBP8.89□□□□□ -0.99
RIF1-211ENST00000494333 GIT1Q9Y2X7 761 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 PRG3Q9Y2Y8 225 aaPredicted RBP8.89□□□□□ -0.99
RIF1-211ENST00000494333 USP15Q9Y4E8 981 aaPredicted RBP8.89□□□□□ -0.99
RIF1-211ENST00000494333 HCFC2Q9Y5Z7 792 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 BRWD1Q9NSI6 2320 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 SPTBN5Q9NRC6 3674 aaKnown RBP8.89□□□□□ -0.99
RIF1-211ENST00000494333 VWA3AA6NCI4 1184 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 PRR33A8MZF0 331 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 ACKR2O00590 384 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 TNFRSF10CO14798 259 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 CLASP2O75122 1294 aaKnown RBP8.88□□□□□ -0.99
RIF1-211ENST00000494333 SSBP05455 408 aaKnown RBP eCLIP8.88□□□□□ -0.99
RIF1-211ENST00000494333 HOXB8P17481 243 aaPredicted RBP8.88□□□□□ -0.99
RIF1-211ENST00000494333 ITIH2P19823 946 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 ATP2C1P98194 919 aaPredicted RBP8.88□□□□□ -0.99
RIF1-211ENST00000494333 PRPF4BQ13523 1007 aaKnown RBP8.88□□□□□ -0.99
RIF1-211ENST00000494333 PPP2R5AQ15172 486 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 FAM187BQ17R55 369 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 TMEM31Q5JXX7 168 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 SYCE2Q6PIF2 218 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 LSRQ86X29 649 aaPredicted RBP8.88□□□□□ -0.99
RIF1-211ENST00000494333 GSTCDQ8NEC7 633 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 KIFAP3Q92845 792 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 CASP10Q92851 521 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 SHDQ96IW2 340 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 RPGRIP1Q96KN7 1286 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 ADPGKQ9BRR6 497 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 LRFN3Q9BTN0 628 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 MMTAG2Q9BU76 263 aaKnown RBP8.88□□□□□ -0.99
RIF1-211ENST00000494333 KIFC3Q9BVG8 833 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 PHF7Q9BWX1 381 aaPredicted RBP8.88□□□□□ -0.99
RIF1-211ENST00000494333 VN1R3Q9BXE9 311 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 IRAK3Q9Y616 596 aa8.88□□□□□ -0.99
RIF1-211ENST00000494333 MUC3AQ02505 3323 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 FAM86C2PA6NEL3 165 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 CCDC169A6NNP5 214 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 K7ERI5 159 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 N4BP3O15049 544 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 INPPL1O15357 1258 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 DCXO43602 365 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 CBX7O95931 251 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 PRKCBP05771 671 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 GIPRP48546 466 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 EFNA5P52803 228 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 PEX3P56589 373 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 DSC1Q08554 894 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 CBX2Q14781 532 aaPredicted RBP8.87□□□□□ -0.99
RIF1-211ENST00000494333 PTPN14Q15678 1187 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 RINT1Q6NUQ1 792 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 C22orf34Q6ZV56 151 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 TAS1R1Q7RTX1 841 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 KCNK18Q7Z418 384 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 NETO1Q8TDF5 533 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 CPLX3Q8WVH0 158 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 SUSD6Q92537 303 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 RABGGTAQ92696 567 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 COX4I2Q96KJ9 171 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 KLHL5Q96PQ7 755 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 RPS6KC1Q96S38 1066 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 PLIN2Q99541 437 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 COLEC11Q9BWP8 271 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 CCDC113Q9H0I3 377 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 PDZD7Q9H5P4 517 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 MRPL17Q9NRX2 175 aaKnown RBP8.87□□□□□ -0.99
RIF1-211ENST00000494333 SNTG2Q9NY99 539 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 STK39Q9UEW8 545 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 RAPGEFL1Q9UHV5 662 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 STRIP2Q9ULQ0 834 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 PLXNA4Q9HCM2 1894 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 KIAA1671Q9BY89 1806 aa8.87□□□□□ -0.99
RIF1-211ENST00000494333 KIAA1324LA8MWY0 1029 aaPredicted RBP8.86□□□□□ -0.99
RIF1-211ENST00000494333 LOC730098B7Z3J9 87 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 F8W810 466 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 HIP1RO75146 1068 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 SOD2P04179 222 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 EDN1P05305 212 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 CEACAM5P06731 702 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 CNPP09543 421 aaKnown RBP8.86□□□□□ -0.99
RIF1-211ENST00000494333 EPCAMP16422 314 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 SPINK2P20155 84 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 KLRC2P26717 231 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 DNAJA1P31689 397 aaKnown RBP8.86□□□□□ -0.99
RIF1-211ENST00000494333 NPTX2P47972 431 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 ARID5AQ03989 594 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 ITIH3Q06033 890 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 CUL4AQ13619 759 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 NT5DC1Q5TFE4 455 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 EEF1DP3Q658K8 133 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 ARL6IP4Q66PJ3 421 aaKnown RBP8.86□□□□□ -0.99
RIF1-211ENST00000494333 KIAA1841Q6NSI8 718 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 CES5AQ6NT32 575 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 C1orf186Q6ZWK4 172 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 PPFIBP1Q86W92 1011 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 DAW1Q8N136 415 aa8.86□□□□□ -0.99
RIF1-211ENST00000494333 C12orf76Q8N812 135 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms