RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 GPRC5DQ9NZD1 345 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 OGDHLQ9ULD0 1010 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 CORO2BQ9UQ03 480 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 COA3Q9Y2R0 106 aaPredicted RBP3.31□□□□□ -1.88
UBXN4-208ENST00000490163 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.31□□□□□ -1.88
UBXN4-208ENST00000490163 MROH2AA6NES4 1674 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 MROH1Q8NDA8 1641 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 CDK13Q14004 1512 aaKnown RBP3.31□□□□□ -1.88
UBXN4-208ENST00000490163 FSD2A1L4K1 749 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 RNGTTO60942 597 aaKnown RBP3.31□□□□□ -1.88
UBXN4-208ENST00000490163 TULP3O75386 442 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 SELLP14151 372 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 MLH1P40692 756 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 AFMP43652 599 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 CARSP49589 748 aaKnown RBP3.31□□□□□ -1.88
UBXN4-208ENST00000490163 CDK5R2Q13319 367 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 ZNF766Q5HY98 468 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 GARNL3Q5VVW2 1013 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 LIPMQ5VYY2 423 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 PAQR3Q6TCH7 311 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 LIPIQ6XZB0 460 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 DOK3Q7L591 496 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 MSL3Q8N5Y2 521 aaKnown RBP3.31□□□□□ -1.88
UBXN4-208ENST00000490163 CHST13Q8NET6 341 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 USP6NLQ92738 828 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 LPPQ93052 612 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 LENG8Q96PV6 779 aaPredicted RBP3.31□□□□□ -1.88
UBXN4-208ENST00000490163 TUBGCP5Q96RT8 1024 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 MAP7D2Q96T17 732 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 NDC1Q9BTX1 674 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 MTG2Q9H4K7 406 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 CYP4F11Q9HBI6 524 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 INCENPQ9NQS7 918 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 POLR3BQ9NW08 1133 aaPredicted RBP3.31□□□□□ -1.88
UBXN4-208ENST00000490163 SEC63Q9UGP8 760 aaKnown RBP3.31□□□□□ -1.88
UBXN4-208ENST00000490163 SLC23A1Q9UHI7 598 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 PCDHB4Q9Y5E5 795 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 HS3ST4Q9Y661 456 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 UACAQ9BZF9 1416 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 RRBP1Q9P2E9 1410 aaKnown RBP3.31□□□□□ -1.88
UBXN4-208ENST00000490163 SPATA31A3Q5VYP0 1347 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 ARHGEF40Q8TER5 1519 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 WASH4PA8MWX3 477 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 SCAMP1O15126 338 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 C22orf31O95567 290 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 CYP3A4P08684 503 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 MYBP10242 640 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 ACADMP11310 421 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 PCSK1P29120 753 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 RGS2P41220 211 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 NRG3P56975 720 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 RBP5P82980 135 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 CYP27A1Q02318 531 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 TAF7Q15545 349 aaPredicted RBP3.31□□□□□ -1.88
UBXN4-208ENST00000490163 VWA3BQ502W6 1294 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 CBWD5Q5RIA9 395 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 KAZNQ674X7 775 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 RAP1GAP2Q684P5 730 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 ISM2Q6H9L7 571 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 NAA16Q6N069 864 aaPredicted RBP3.31□□□□□ -1.88
UBXN4-208ENST00000490163 HMBOX1Q6NT76 420 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 ZNF783Q6ZMS7 281 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 LRRC8DQ7L1W4 858 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 NAT8LQ8N9F0 302 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 OR6B3Q8NGW1 331 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 LILRB1Q8NHL6 650 aaPredicted RBP3.31□□□□□ -1.88
UBXN4-208ENST00000490163 RILPL2Q969X0 211 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 IQCDQ96DY2 449 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 VMP1Q96GC9 406 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 NT5C3AQ9H0P0 336 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 CD248Q9HCU0 757 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 TMOD4Q9NZQ9 345 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 DKK2Q9UBU2 259 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 FEZ2Q9UHY8 353 aaPredicted RBP3.31□□□□□ -1.88
UBXN4-208ENST00000490163 LEF1Q9UJU2 399 aaPredicted RBP3.31□□□□□ -1.88
UBXN4-208ENST00000490163 DAPP1Q9UN19 280 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 EDARQ9UNE0 448 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 AP4E1Q9UPM8 1137 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 LYVE1Q9Y5Y7 322 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 KIDINS220Q9ULH0 1771 aa3.31□□□□□ -1.88
UBXN4-208ENST00000490163 ADGRL2O95490 1459 aa3.3□□□□□ -1.88
UBXN4-208ENST00000490163 FHOD3Q2V2M9 1422 aa3.3□□□□□ -1.88
UBXN4-208ENST00000490163 AKNAQ7Z591 1439 aa3.3□□□□□ -1.88
UBXN4-208ENST00000490163 P4HA2O15460 535 aa3.3□□□□□ -1.88
UBXN4-208ENST00000490163 COBLO75128 1261 aa3.3□□□□□ -1.88
UBXN4-208ENST00000490163 SPATA31C1P0DKV0 1188 aa3.3□□□□□ -1.88
UBXN4-208ENST00000490163 ZSCAN22P10073 491 aaPredicted RBP3.3□□□□□ -1.88
UBXN4-208ENST00000490163 IGFBP6P24592 240 aaPredicted RBP3.3□□□□□ -1.88
UBXN4-208ENST00000490163 SLC6A4P31645 630 aa3.3□□□□□ -1.88
UBXN4-208ENST00000490163 CASP3P42574 277 aa3.3□□□□□ -1.88
UBXN4-208ENST00000490163 RGS3P49796 1198 aa3.3□□□□□ -1.88
UBXN4-208ENST00000490163 GALK1P51570 392 aa3.3□□□□□ -1.88
UBXN4-208ENST00000490163 SLC14A1Q13336 389 aa3.3□□□□□ -1.88
UBXN4-208ENST00000490163 ACOX1Q15067 660 aa3.3□□□□□ -1.88
UBXN4-208ENST00000490163 CTXN3Q4LDR2 81 aa3.3□□□□□ -1.88
UBXN4-208ENST00000490163 FAM47AQ5JRC9 791 aa3.3□□□□□ -1.88
UBXN4-208ENST00000490163 GRAMD4Q6IC98 578 aa3.3□□□□□ -1.88
UBXN4-208ENST00000490163 SLC30A6Q6NXT4 461 aa3.3□□□□□ -1.88
UBXN4-208ENST00000490163 TEPPQ6URK8 271 aa3.3□□□□□ -1.88
UBXN4-208ENST00000490163 FAM180AQ6UWF9 173 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms