RNA–Protein interactions for RNA: ENST00000490108.1

TSC2-215, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-215ENST00000490108 CYP27A1Q02318 531 aa21.39■■□□□ 1.01
TSC2-215ENST00000490108 EHHADHQ08426 723 aa21.39■■□□□ 1.01
TSC2-215ENST00000490108 CUL4BQ13620 913 aa21.39■■□□□ 1.01
TSC2-215ENST00000490108 PKP1Q13835 747 aa21.39■■□□□ 1.01
TSC2-215ENST00000490108 ZNF268Q14587 947 aaPredicted RBP21.39■■□□□ 1.01
TSC2-215ENST00000490108 RESP18Q5W5W9 173 aa21.39■■□□□ 1.01
TSC2-215ENST00000490108 MRPL45Q9BRJ2 306 aaKnown RBP21.39■■□□□ 1.01
TSC2-215ENST00000490108 SNX25Q9H3E2 840 aa21.39■■□□□ 1.01
TSC2-215ENST00000490108 USP18Q9UMW8 372 aa21.39■■□□□ 1.01
TSC2-215ENST00000490108 OTOL1A6NHN0 477 aaPredicted RBP21.38■■□□□ 1.01
TSC2-215ENST00000490108 K7ESF4 209 aa21.38■■□□□ 1.01
TSC2-215ENST00000490108 USP17L7P0C7H9 530 aa21.38■■□□□ 1.01
TSC2-215ENST00000490108 GRIK1P39086 918 aa21.38■■□□□ 1.01
TSC2-215ENST00000490108 TNNC1P63316 161 aa21.38■■□□□ 1.01
TSC2-215ENST00000490108 SRSF5Q13243 272 aaKnown RBP21.38■■□□□ 1.01
TSC2-215ENST00000490108 MTF1Q14872 753 aa21.38■■□□□ 1.01
TSC2-215ENST00000490108 MAPRE1Q15691 268 aaKnown RBP21.38■■□□□ 1.01
TSC2-215ENST00000490108 RSPO4Q2I0M5 234 aaPredicted RBP21.38■■□□□ 1.01
TSC2-215ENST00000490108 MDH1BQ5I0G3 518 aa21.38■■□□□ 1.01
TSC2-215ENST00000490108 DGLUCYQ7Z3D6 616 aa21.38■■□□□ 1.01
TSC2-215ENST00000490108 CEP57L1Q8IYX8 460 aa21.38■■□□□ 1.01
TSC2-215ENST00000490108 FSIP1Q8NA03 581 aa21.38■■□□□ 1.01
TSC2-215ENST00000490108 SLC22A12Q96S37 553 aa21.38■■□□□ 1.01
TSC2-215ENST00000490108 C2orf78A6NCI8 922 aa21.37■■□□□ 1.01
TSC2-215ENST00000490108 CLSTN1O94985 981 aa21.37■■□□□ 1.01
TSC2-215ENST00000490108 PAPSS2O95340 614 aaPredicted RBP21.37■■□□□ 1.01
TSC2-215ENST00000490108 PDIA4P13667 645 aaKnown RBP21.37■■□□□ 1.01
TSC2-215ENST00000490108 ANXA13P27216 316 aa21.37■■□□□ 1.01
TSC2-215ENST00000490108 SNRPFP62306 86 aaKnown RBP21.37■■□□□ 1.01
TSC2-215ENST00000490108 DNM1Q05193 864 aaKnown RBP21.37■■□□□ 1.01
TSC2-215ENST00000490108 FAM160A1Q05DH4 1040 aa21.37■■□□□ 1.01
TSC2-215ENST00000490108 GRSF1Q12849 480 aaKnown RBP eCLIP21.37■■□□□ 1.01
TSC2-215ENST00000490108 TRPC3Q13507 836 aa21.37■■□□□ 1.01
TSC2-215ENST00000490108 SIM2Q14190 667 aaPredicted RBP21.37■■□□□ 1.01
TSC2-215ENST00000490108 PUM1Q14671 1186 aaKnown RBP eCLIP21.37■■□□□ 1.01
TSC2-215ENST00000490108 PDGFRLQ15198 375 aa21.37■■□□□ 1.01
TSC2-215ENST00000490108 FSTL4Q6MZW2 842 aa21.37■■□□□ 1.01
TSC2-215ENST00000490108 SYNPOQ8N3V7 929 aa21.37■■□□□ 1.01
TSC2-215ENST00000490108 GPR161Q8N6U8 529 aaKnown RBP21.37■■□□□ 1.01
TSC2-215ENST00000490108 ARL14EPQ8N8R7 260 aaPredicted RBP21.37■■□□□ 1.01
TSC2-215ENST00000490108 OR6B3Q8NGW1 331 aa21.37■■□□□ 1.01
TSC2-215ENST00000490108 PCED1BQ96HM7 432 aa21.37■■□□□ 1.01
TSC2-215ENST00000490108 CYP2S1Q96SQ9 504 aa21.37■■□□□ 1.01
TSC2-215ENST00000490108 PTPRDP23468 1912 aa21.37■■□□□ 1.01
TSC2-215ENST00000490108 GREB1Q4ZG55 1949 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 ANAPC1Q9H1A4 1944 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 PVALEFA0A1B0GWK0 134 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 CST3P01034 146 aaPredicted RBP21.36■■□□□ 1.01
TSC2-215ENST00000490108 HOXC13P31276 330 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 IFNAR2P48551 515 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 USP4Q13107 963 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 KCNB1Q14721 858 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 ZNF77Q15935 545 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 BMT2Q1RMZ1 405 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 TMEM196Q5HYL7 178 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 LAIR1Q6GTX8 287 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 PKN3Q6P5Z2 889 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 VSTM1Q6UX27 236 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 LONP2Q86WA8 852 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 CPA6Q8N4T0 437 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 MYCBPAPQ8TBZ2 947 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 CHFRQ96EP1 664 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 DUS2Q9NX74 493 aaKnown RBP21.36■■□□□ 1.01
TSC2-215ENST00000490108 SERTAD1Q9UHV2 236 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 CFAP45Q9UL16 551 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 WNT6Q9Y6F9 365 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 CACNA1AO00555 2505 aa21.36■■□□□ 1.01
TSC2-215ENST00000490108 DNAH14Q0VDD8 3507 aa21.35■■□□□ 1.01
TSC2-215ENST00000490108 EXOC3O60645 756 aa21.35■■□□□ 1.01
TSC2-215ENST00000490108 PHACTR2O75167 634 aa21.35■■□□□ 1.01
TSC2-215ENST00000490108 GNL1P36915 607 aaPredicted RBP21.35■■□□□ 1.01
TSC2-215ENST00000490108 CASP4P49662 377 aa21.35■■□□□ 1.01
TSC2-215ENST00000490108 MYL6P60660 151 aa21.35■■□□□ 1.01
TSC2-215ENST00000490108 AMPD2Q01433 879 aa21.35■■□□□ 1.01
TSC2-215ENST00000490108 KNOP1Q1ED39 458 aaKnown RBP21.35■■□□□ 1.01
TSC2-215ENST00000490108 WDR72Q3MJ13 1102 aa21.35■■□□□ 1.01
TSC2-215ENST00000490108 NAIF1Q69YI7 327 aaPredicted RBP21.35■■□□□ 1.01
TSC2-215ENST00000490108 ATL3Q6DD88 541 aa21.35■■□□□ 1.01
TSC2-215ENST00000490108 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.35■■□□□ 1.01
TSC2-215ENST00000490108 SH3RF2Q8TEC5 729 aa21.35■■□□□ 1.01
TSC2-215ENST00000490108 SPATA17Q96L03 361 aa21.35■■□□□ 1.01
TSC2-215ENST00000490108 GZF1Q9H116 711 aaPredicted RBP21.35■■□□□ 1.01
TSC2-215ENST00000490108 DPEP3Q9H4B8 488 aa21.35■■□□□ 1.01
TSC2-215ENST00000490108 PARD6AQ9NPB6 346 aa21.35■■□□□ 1.01
TSC2-215ENST00000490108 EXOC1Q9NV70 894 aa21.35■■□□□ 1.01
TSC2-215ENST00000490108 GCNT4Q9P109 453 aa21.35■■□□□ 1.01
TSC2-215ENST00000490108 CGNQ9P2M7 1197 aaKnown RBP21.35■■□□□ 1.01
TSC2-215ENST00000490108 NXF1Q9UBU9 619 aaKnown RBP21.35■■□□□ 1.01
TSC2-215ENST00000490108 NME7Q9Y5B8 376 aa21.35■■□□□ 1.01
TSC2-215ENST00000490108 HELZP42694 1942 aaKnown RBP21.34■■□□□ 1.01
TSC2-215ENST00000490108 TRDMT1O14717 391 aaKnown RBP21.34■■□□□ 1.01
TSC2-215ENST00000490108 TRIM66O15016 1216 aa21.34■■□□□ 1.01
TSC2-215ENST00000490108 HRO43593 1189 aa21.34■■□□□ 1.01
TSC2-215ENST00000490108 TACC1O75410 805 aa21.34■■□□□ 1.01
TSC2-215ENST00000490108 EGFP01133 1207 aa21.34■■□□□ 1.01
TSC2-215ENST00000490108 USP46P62068 366 aa21.34■■□□□ 1.01
TSC2-215ENST00000490108 LMNB2Q03252 620 aa21.34■■□□□ 1.01
TSC2-215ENST00000490108 BIRC3Q13489 604 aa21.34■■□□□ 1.01
TSC2-215ENST00000490108 DENND5BQ6ZUT9 1274 aa21.34■■□□□ 1.01
TSC2-215ENST00000490108 C12orf56Q8IXR9 622 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms