RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 ALCAMQ13740 583 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 ST3GAL2Q16842 350 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 PLK5Q496M5 336 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 STPG1Q5TH74 334 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 LMBRD2Q68DH5 695 aaPredicted RBP17.01■□□□□ 0.31
PLOD3-216ENST00000489927 FAM173BQ6P4H8 233 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 FAM171BQ6P995 826 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 ARL14EPQ8N8R7 260 aaPredicted RBP17.01■□□□□ 0.31
PLOD3-216ENST00000489927 SH3RF2Q8TEC5 729 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 ATP2A3Q93084 1043 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 EXOC4Q96A65 974 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 FUBP3Q96I24 572 aaKnown RBP eCLIP17.01■□□□□ 0.31
PLOD3-216ENST00000489927 PANK2Q9BZ23 570 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 UPF2Q9HAU5 1272 aaKnown RBP17.01■□□□□ 0.31
PLOD3-216ENST00000489927 GCNT4Q9P109 453 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 PCDHGA5Q9Y5G8 931 aa17.01■□□□□ 0.31
PLOD3-216ENST00000489927 PTPRJQ12913 1337 aa17■□□□□ 0.31
PLOD3-216ENST00000489927 A0A087X0B3 334 aa17■□□□□ 0.31
PLOD3-216ENST00000489927 DCLK1O15075 740 aa17■□□□□ 0.31
PLOD3-216ENST00000489927 PRPF6O94906 941 aaKnown RBP17■□□□□ 0.31
PLOD3-216ENST00000489927 LMO2P25791 158 aa17■□□□□ 0.31
PLOD3-216ENST00000489927 PSMC1P62191 440 aaKnown RBP17■□□□□ 0.31
PLOD3-216ENST00000489927 PSMD2Q13200 908 aa17■□□□□ 0.31
PLOD3-216ENST00000489927 DMC1Q14565 340 aa17■□□□□ 0.31
PLOD3-216ENST00000489927 TCEAL6Q6IPX3 200 aa17■□□□□ 0.31
PLOD3-216ENST00000489927 CCDC73Q6ZRK6 1079 aa17■□□□□ 0.31
PLOD3-216ENST00000489927 GPD1LQ8N335 351 aa17■□□□□ 0.31
PLOD3-216ENST00000489927 FSIP1Q8NA03 581 aa17■□□□□ 0.31
PLOD3-216ENST00000489927 KBTBD7Q8WVZ9 684 aa17■□□□□ 0.31
PLOD3-216ENST00000489927 TCEAL3Q969E4 200 aa17■□□□□ 0.31
PLOD3-216ENST00000489927 CHAMP1Q96JM3 812 aa17■□□□□ 0.31
PLOD3-216ENST00000489927 DUSP15Q9H1R2 295 aaPredicted RBP17■□□□□ 0.31
PLOD3-216ENST00000489927 LINC00597Q9H2U6 94 aa17■□□□□ 0.31
PLOD3-216ENST00000489927 PANK4Q9NVE7 773 aa17■□□□□ 0.31
PLOD3-216ENST00000489927 INTS13Q9NVM9 706 aa17■□□□□ 0.31
PLOD3-216ENST00000489927 ZNF638Q14966 1978 aaKnown RBP17■□□□□ 0.31
PLOD3-216ENST00000489927 EML5Q05BV3 1969 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 APBB3O95704 486 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 HDCP19113 662 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 STAT6P42226 847 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 MAGEA11P43364 429 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 MYO1EQ12965 1108 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 RESTQ13127 1097 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 CUL4AQ13619 759 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 KCNB1Q14721 858 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 N4BP2L1Q5TBK1 243 aaPredicted RBP16.99■□□□□ 0.31
PLOD3-216ENST00000489927 C4orf50Q6ZRC1 276 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 DPH6Q7L8W6 267 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 LIMS2Q7Z4I7 341 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 OR5B17Q8NGF7 314 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 MYLPFQ96A32 169 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 ACDQ96AP0 544 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 HPDLQ96IR7 371 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 ANKRD36BP1Q96IX9 119 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 SYT15Q9BQS2 421 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 CRTAC1Q9NQ79 661 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 VPS45Q9NRW7 570 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 MAGEC2Q9UBF1 373 aaPredicted RBP16.99■□□□□ 0.31
PLOD3-216ENST00000489927 EBF1Q9UH73 591 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 ARHGAP26Q9UNA1 814 aa16.99■□□□□ 0.31
PLOD3-216ENST00000489927 R3HCC1Q9Y3T6 440 aaKnown RBP16.99■□□□□ 0.31
PLOD3-216ENST00000489927 TCF3P15923 654 aa16.98■□□□□ 0.31
PLOD3-216ENST00000489927 PDCP20941 246 aa16.98■□□□□ 0.31
PLOD3-216ENST00000489927 PMLP29590 882 aa16.98■□□□□ 0.31
PLOD3-216ENST00000489927 USP46P62068 366 aa16.98■□□□□ 0.31
PLOD3-216ENST00000489927 ZXDBP98169 803 aa16.98■□□□□ 0.31
PLOD3-216ENST00000489927 CBWD2Q8IUF1 395 aa16.98■□□□□ 0.31
PLOD3-216ENST00000489927 GLIS3Q8NEA6 775 aa16.98■□□□□ 0.31
PLOD3-216ENST00000489927 SPATA17Q96L03 361 aa16.98■□□□□ 0.31
PLOD3-216ENST00000489927 ANGPTL2Q9UKU9 493 aa16.98■□□□□ 0.31
PLOD3-216ENST00000489927 CDH9Q9ULB4 789 aa16.98■□□□□ 0.31
PLOD3-216ENST00000489927 SDK1Q7Z5N4 2213 aa16.98■□□□□ 0.31
PLOD3-216ENST00000489927 ATG2BQ96BY7 2078 aa16.98■□□□□ 0.31
PLOD3-216ENST00000489927 MAP1BP46821 2468 aaKnown RBP16.97■□□□□ 0.31
PLOD3-216ENST00000489927 KIAA0391O15091 583 aaKnown RBP16.97■□□□□ 0.31
PLOD3-216ENST00000489927 BDNFP23560 247 aa16.97■□□□□ 0.31
PLOD3-216ENST00000489927 GRIK1P39086 918 aa16.97■□□□□ 0.31
PLOD3-216ENST00000489927 CYP27A1Q02318 531 aa16.97■□□□□ 0.31
PLOD3-216ENST00000489927 CREB5Q02930 508 aa16.97■□□□□ 0.31
PLOD3-216ENST00000489927 NR1H3Q13133 447 aa16.97■□□□□ 0.31
PLOD3-216ENST00000489927 ELF2Q15723 593 aa16.97■□□□□ 0.31
PLOD3-216ENST00000489927 VSTM1Q6UX27 236 aa16.97■□□□□ 0.31
PLOD3-216ENST00000489927 DENND5BQ6ZUT9 1274 aa16.97■□□□□ 0.31
PLOD3-216ENST00000489927 HPS3Q969F9 1004 aa16.97■□□□□ 0.31
PLOD3-216ENST00000489927 LSM14BQ9BX40 385 aaKnown RBP16.97■□□□□ 0.31
PLOD3-216ENST00000489927 SPAG17Q6Q759 2223 aa16.97■□□□□ 0.31
PLOD3-216ENST00000489927 ANTXRLA6NF34 631 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 ZNF233A6NK53 670 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 RHOBTB1O94844 696 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 NFATC1O95644 943 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 TNNC2P02585 160 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 PDGFRBP09619 1106 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 SYT1P21579 422 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 WARSP23381 471 aaKnown RBP16.96■□□□□ 0.31
PLOD3-216ENST00000489927 OPRD1P41143 372 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 PDE6CP51160 858 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 DGKEP52429 567 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 DUOXA2Q1HG44 320 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 C2orf27AQ580R0 203 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 RNF43Q68DV7 783 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms