RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 ZNF217O75362 1048 aa16.32■□□□□ 0.2
UFD1-209ENST00000489406 APODP05090 189 aa16.32■□□□□ 0.2
UFD1-209ENST00000489406 NAMPTP43490 491 aa16.32■□□□□ 0.2
UFD1-209ENST00000489406 BNC1Q01954 994 aa16.32■□□□□ 0.2
UFD1-209ENST00000489406 NID2Q14112 1375 aa16.32■□□□□ 0.2
UFD1-209ENST00000489406 NECTIN1Q15223 517 aa16.32■□□□□ 0.2
UFD1-209ENST00000489406 ZNF568Q3ZCX4 644 aa16.32■□□□□ 0.2
UFD1-209ENST00000489406 DHX32Q7L7V1 743 aaKnown RBP16.32■□□□□ 0.2
UFD1-209ENST00000489406 OR10T2Q8NGX3 314 aa16.32■□□□□ 0.2
UFD1-209ENST00000489406 SH3RF2Q8TEC5 729 aa16.32■□□□□ 0.2
UFD1-209ENST00000489406 MED8Q96G25 268 aa16.32■□□□□ 0.2
UFD1-209ENST00000489406 LSG1Q9H089 658 aaKnown RBP16.32■□□□□ 0.2
UFD1-209ENST00000489406 MIR1-1HGQ9H1L0 117 aa16.32■□□□□ 0.2
UFD1-209ENST00000489406 CPNE5Q9HCH3 593 aa16.32■□□□□ 0.2
UFD1-209ENST00000489406 CD93Q9NPY3 652 aa16.32■□□□□ 0.2
UFD1-209ENST00000489406 SH3GLB2Q9NR46 395 aa16.32■□□□□ 0.2
UFD1-209ENST00000489406 GMIPQ9P107 970 aa16.32■□□□□ 0.2
UFD1-209ENST00000489406 KRT38O76015 456 aa16.31■□□□□ 0.2
UFD1-209ENST00000489406 USP17L7P0C7H9 530 aa16.31■□□□□ 0.2
UFD1-209ENST00000489406 GP1BBP13224 206 aa16.31■□□□□ 0.2
UFD1-209ENST00000489406 HNF1BP35680 557 aa16.31■□□□□ 0.2
UFD1-209ENST00000489406 RTP5Q14D33 572 aa16.31■□□□□ 0.2
UFD1-209ENST00000489406 SUZ12Q15022 739 aaKnown RBP16.31■□□□□ 0.2
UFD1-209ENST00000489406 ZC2HC1CQ53FD0 456 aaPredicted RBP16.31■□□□□ 0.2
UFD1-209ENST00000489406 FOXJ1Q92949 421 aa16.31■□□□□ 0.2
UFD1-209ENST00000489406 ERLEC1Q96DZ1 483 aa16.31■□□□□ 0.2
UFD1-209ENST00000489406 RNF26Q9BY78 433 aaPredicted RBP16.31■□□□□ 0.2
UFD1-209ENST00000489406 FLNCQ14315 2725 aa16.3■□□□□ 0.2
UFD1-209ENST00000489406 CCNT1O60563 726 aaKnown RBP16.3■□□□□ 0.2
UFD1-209ENST00000489406 HAPLN1P10915 354 aaPredicted RBP16.3■□□□□ 0.2
UFD1-209ENST00000489406 WASP42768 502 aa16.3■□□□□ 0.2
UFD1-209ENST00000489406 AARSP49588 968 aaKnown RBP eCLIP16.3■□□□□ 0.2
UFD1-209ENST00000489406 KDSRQ06136 332 aa16.3■□□□□ 0.2
UFD1-209ENST00000489406 TARDBPQ13148 414 aaKnown RBP eCLIP16.3■□□□□ 0.2
UFD1-209ENST00000489406 IL27RAQ6UWB1 636 aa16.3■□□□□ 0.2
UFD1-209ENST00000489406 TTC9Q92623 222 aa16.3■□□□□ 0.2
UFD1-209ENST00000489406 LGMNQ99538 433 aa16.3■□□□□ 0.2
UFD1-209ENST00000489406 NRSN2Q9GZP1 204 aa16.3■□□□□ 0.2
UFD1-209ENST00000489406 TMEM206Q9H813 350 aa16.3■□□□□ 0.2
UFD1-209ENST00000489406 POLD4Q9HCU8 107 aa16.3■□□□□ 0.2
UFD1-209ENST00000489406 ARHGEF4Q9NR80 690 aa16.3■□□□□ 0.2
UFD1-209ENST00000489406 DAXXQ9UER7 740 aaPredicted RBP16.3■□□□□ 0.2
UFD1-209ENST00000489406 OBSL1O75147 1896 aa16.3■□□□□ 0.2
UFD1-209ENST00000489406 TRAV19A0A0A6YYK7 116 aa16.29■□□□□ 0.2
UFD1-209ENST00000489406 MEI4A8MW99 385 aa16.29■□□□□ 0.2
UFD1-209ENST00000489406 BRINP1O60477 761 aa16.29■□□□□ 0.2
UFD1-209ENST00000489406 TADA3O75528 432 aa16.29■□□□□ 0.2
UFD1-209ENST00000489406 CYP17A1P05093 508 aa16.29■□□□□ 0.2
UFD1-209ENST00000489406 HARSP12081 509 aaKnown RBP16.29■□□□□ 0.2
UFD1-209ENST00000489406 HOXB2P14652 356 aa16.29■□□□□ 0.2
UFD1-209ENST00000489406 TYMPP19971 482 aa16.29■□□□□ 0.2
UFD1-209ENST00000489406 EFNA5P52803 228 aa16.29■□□□□ 0.2
UFD1-209ENST00000489406 TMPRSS3P57727 454 aa16.29■□□□□ 0.2
UFD1-209ENST00000489406 SPAG1Q07617 926 aa16.29■□□□□ 0.2
UFD1-209ENST00000489406 NTRK3Q16288 839 aa16.29■□□□□ 0.2
UFD1-209ENST00000489406 C12orf40Q86WS4 652 aa16.29■□□□□ 0.2
UFD1-209ENST00000489406 ARL14EPQ8N8R7 260 aaPredicted RBP16.29■□□□□ 0.2
UFD1-209ENST00000489406 LRRC15Q8TF66 581 aa16.29■□□□□ 0.2
UFD1-209ENST00000489406 NAF1Q96HR8 494 aaKnown RBP16.29■□□□□ 0.2
UFD1-209ENST00000489406 RWDD1Q9H446 243 aaPredicted RBP16.29■□□□□ 0.2
UFD1-209ENST00000489406 PTPRHQ9HD43 1115 aa16.29■□□□□ 0.2
UFD1-209ENST00000489406 HEMK1Q9Y5R4 338 aaPredicted RBP16.29■□□□□ 0.2
UFD1-209ENST00000489406 A0A0A0MRY4 1105 aa16.28■□□□□ 0.2
UFD1-209ENST00000489406 K7ERI5 159 aa16.28■□□□□ 0.2
UFD1-209ENST00000489406 ZBTB24O43167 697 aaPredicted RBP16.28■□□□□ 0.2
UFD1-209ENST00000489406 BAG4O95429 457 aaKnown RBP16.28■□□□□ 0.2
UFD1-209ENST00000489406 IGHDP01880 384 aa16.28■□□□□ 0.2
UFD1-209ENST00000489406 GCFC2P16383 781 aaKnown RBP16.28■□□□□ 0.2
UFD1-209ENST00000489406 NDUFV2P19404 249 aa16.28■□□□□ 0.2
UFD1-209ENST00000489406 ACTN2P35609 894 aa16.28■□□□□ 0.2
UFD1-209ENST00000489406 GRIA2P42262 883 aa16.28■□□□□ 0.2
UFD1-209ENST00000489406 TNFRSF4P43489 277 aa16.28■□□□□ 0.2
UFD1-209ENST00000489406 GPR15P49685 360 aa16.28■□□□□ 0.2
UFD1-209ENST00000489406 SDHAF4Q5VUM1 108 aa16.28■□□□□ 0.2
UFD1-209ENST00000489406 ZNF574Q6ZN55 896 aaPredicted RBP16.28■□□□□ 0.2
UFD1-209ENST00000489406 NEK8Q86SG6 692 aa16.28■□□□□ 0.2
UFD1-209ENST00000489406 DNASE2BQ8WZ79 361 aa16.28■□□□□ 0.2
UFD1-209ENST00000489406 ACO2Q99798 780 aaKnown RBP16.28■□□□□ 0.2
UFD1-209ENST00000489406 TCHPQ9BT92 498 aa16.28■□□□□ 0.2
UFD1-209ENST00000489406 FAM117AQ9C073 453 aa16.28■□□□□ 0.2
UFD1-209ENST00000489406 ZCWPW1Q9H0M4 648 aa16.28■□□□□ 0.2
UFD1-209ENST00000489406 ABI2Q9NYB9 513 aaPredicted RBP16.28■□□□□ 0.2
UFD1-209ENST00000489406 MYO18AQ92614 2054 aaKnown RBP16.28■□□□□ 0.2
UFD1-209ENST00000489406 CITO14578 2027 aa16.28■□□□□ 0.2
UFD1-209ENST00000489406 CABIN1Q9Y6J0 2220 aa16.27■□□□□ 0.2
UFD1-209ENST00000489406 STK36Q9NRP7 1315 aa16.27■□□□□ 0.2
UFD1-209ENST00000489406 ABCA12Q86UK0 2595 aa16.27■□□□□ 0.2
UFD1-209ENST00000489406 BTBD18B2RXH4 712 aa16.27■□□□□ 0.2
UFD1-209ENST00000489406 XRCC6P12956 609 aaKnown RBP eCLIP16.27■□□□□ 0.2
UFD1-209ENST00000489406 GRK6P43250 576 aa16.27■□□□□ 0.2
UFD1-209ENST00000489406 RESTQ13127 1097 aa16.27■□□□□ 0.2
UFD1-209ENST00000489406 PPP2R5AQ15172 486 aa16.27■□□□□ 0.2
UFD1-209ENST00000489406 DHCR24Q15392 516 aa16.27■□□□□ 0.2
UFD1-209ENST00000489406 NPY5RQ15761 445 aa16.27■□□□□ 0.2
UFD1-209ENST00000489406 SLC10A6Q3KNW5 377 aa16.27■□□□□ 0.2
UFD1-209ENST00000489406 SEZ6Q53EL9 994 aa16.27■□□□□ 0.2
UFD1-209ENST00000489406 USP49Q70CQ1 688 aa16.27■□□□□ 0.2
UFD1-209ENST00000489406 ERICH1Q86X53 443 aa16.27■□□□□ 0.2
UFD1-209ENST00000489406 SLFN12Q8IYM2 578 aa16.27■□□□□ 0.2
UFD1-209ENST00000489406 ZNF513Q8N8E2 541 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms