RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 ZNF606Q8WXB4 792 aa14.12□□□□□ -0.15
COL4A6-207ENST00000487645 TFAP2BQ92481 460 aa14.12□□□□□ -0.15
COL4A6-207ENST00000487645 SMARCD1Q96GM5 515 aa14.12□□□□□ -0.15
COL4A6-207ENST00000487645 SPATA17Q96L03 361 aa14.12□□□□□ -0.15
COL4A6-207ENST00000487645 C8orf48Q96LL4 319 aa14.12□□□□□ -0.15
COL4A6-207ENST00000487645 SEPT5Q99719 369 aaPredicted RBP14.12□□□□□ -0.15
COL4A6-207ENST00000487645 UBXN6Q9BZV1 441 aa14.12□□□□□ -0.15
COL4A6-207ENST00000487645 TTYH3Q9C0H2 523 aa14.12□□□□□ -0.15
COL4A6-207ENST00000487645 NUCKS1Q9H1E3 243 aaKnown RBP14.12□□□□□ -0.15
COL4A6-207ENST00000487645 S1PR5Q9H228 398 aa14.12□□□□□ -0.15
COL4A6-207ENST00000487645 UBE2ZQ9H832 354 aaPredicted RBP14.12□□□□□ -0.15
COL4A6-207ENST00000487645 CSNK1G1Q9HCP0 422 aa14.12□□□□□ -0.15
COL4A6-207ENST00000487645 FAM49BQ9NUQ9 324 aa14.12□□□□□ -0.15
COL4A6-207ENST00000487645 CAPN11Q9UMQ6 739 aa14.12□□□□□ -0.15
COL4A6-207ENST00000487645 NOTCH4Q99466 2003 aa14.12□□□□□ -0.15
COL4A6-207ENST00000487645 PATJQ8NI35 1801 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 O00370 1275 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 XYLBO75191 536 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 TBX10O75333 385 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 CCDC172P0C7W6 258 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 FAM200BP0CF97 657 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 GNA15P30679 374 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 GRIK1P39086 918 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 ZNF75DP51815 510 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 TWF1Q12792 350 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 TRIM14Q14142 442 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 MEA1Q16626 185 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 CES5AQ6NT32 575 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 GPR149Q86SP6 731 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 BAP1Q92560 729 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 MRFAP1L1Q96HT8 127 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 ZNF512Q96ME7 567 aaPredicted RBP14.11□□□□□ -0.15
COL4A6-207ENST00000487645 DUSP16Q9BY84 665 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 ZNF518BQ9C0D4 1074 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 ADAM7Q9H2U9 754 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.11□□□□□ -0.15
COL4A6-207ENST00000487645 YIPF1Q9Y548 306 aa14.11□□□□□ -0.15
COL4A6-207ENST00000487645 RFPL2O75678 378 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 AP1G2O75843 785 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 GFPT2O94808 682 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 PTPN2P17706 415 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 ADORA2BP29275 332 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 CDR1P51861 262 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 SLC8A3P57103 927 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 ZBED6P86452 979 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 VEPH1Q14D04 833 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 DDR2Q16832 855 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 RARS2Q5T160 578 aaKnown RBP14.1□□□□□ -0.15
COL4A6-207ENST00000487645 TMC5Q6UXY8 1006 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 ITIH5Q86UX2 942 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 SLC47A2Q86VL8 602 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 SCN4BQ8IWT1 228 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 ELMOD1Q8N336 334 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 C12orf76Q8N812 135 aaPredicted RBP14.1□□□□□ -0.15
COL4A6-207ENST00000487645 PSMG2Q969U7 264 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 ZNF707Q96C28 371 aaPredicted RBP14.1□□□□□ -0.15
COL4A6-207ENST00000487645 SMOQ99835 787 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 ZSWIM1Q9BR11 485 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 PNPLA8Q9NP80 782 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 DMAP1Q9NPF5 467 aaPredicted RBP14.1□□□□□ -0.15
COL4A6-207ENST00000487645 AIPL1Q9NZN9 384 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 HESX1Q9UBX0 185 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 CD207Q9UJ71 328 aa14.1□□□□□ -0.15
COL4A6-207ENST00000487645 LUC7L2Q9Y383 392 aaKnown RBP14.1□□□□□ -0.15
COL4A6-207ENST00000487645 F8VP50 259 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 CCL16O15467 120 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 THAP12O43422 761 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 SOAT2O75908 522 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 TPM1P09493 284 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 PNMA6AP0CW24 399 aaPredicted RBP14.09□□□□□ -0.15
COL4A6-207ENST00000487645 CSH1P0DML2 217 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 CSH2P0DML3 217 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 CYP11B1P15538 503 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 FERP16591 822 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 NPR3P17342 541 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 ATF6P18850 670 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 BRD2P25440 801 aaKnown RBP14.09□□□□□ -0.15
COL4A6-207ENST00000487645 ANXA13P27216 316 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 KRT9P35527 623 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 CACNA2D1P54289 1103 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 BCAT1P54687 386 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 GOLGA7BQ2TAP0 167 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 PKDCCQ504Y2 493 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 ATAT1Q5SQI0 421 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 IRF2BP2Q7Z5L9 587 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 DNAJB7Q7Z6W7 309 aaPredicted RBP14.09□□□□□ -0.15
COL4A6-207ENST00000487645 ZNF677Q86XU0 584 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 SMRP1Q8NCR6 262 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 SMG7Q92540 1137 aaKnown RBP14.09□□□□□ -0.15
COL4A6-207ENST00000487645 SYN2Q92777 582 aaPredicted RBP14.09□□□□□ -0.15
COL4A6-207ENST00000487645 KCNK16Q96T55 309 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 LHX5Q9H2C1 402 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 PIDD1Q9HB75 910 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 ACP6Q9NPH0 428 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 KRT82Q9NSB4 513 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 TMEM30AQ9NV96 361 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 COMMD8Q9NX08 183 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 EHD2Q9NZN4 543 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 TSPAN16Q9UKR8 245 aa14.09□□□□□ -0.15
COL4A6-207ENST00000487645 PCDHGC3Q9UN70 934 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms