RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 TRIM62Q9BVG3 475 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 DNPEPQ9ULA0 475 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 LRFN2Q9ULH4 789 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 FSCN2O14926 492 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 RPS6KA5O75582 802 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 ASS1P00966 412 aaKnown RBP12.34□□□□□ -0.43
TRA2B-214ENST00000487615 LGALS2P05162 132 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 MX2P20592 715 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 TREML2Q5T2D2 321 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 JADE1Q6IE81 842 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 PARP9Q8IXQ6 854 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 ZC3H3Q8IXZ2 948 aaKnown RBP12.34□□□□□ -0.43
TRA2B-214ENST00000487615 FAM172AQ8WUF8 416 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 C7orf43Q8WVR3 580 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 KLF6Q99612 283 aaPredicted RBP12.34□□□□□ -0.43
TRA2B-214ENST00000487615 MAF1Q9H063 256 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 SIK2Q9H0K1 926 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 TSPAN16Q9UKR8 245 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 COG5Q9UP83 839 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 TNFSF13BQ9Y275 285 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 ZNF536O15090 1300 aa12.33□□□□□ -0.43
TRA2B-214ENST00000487615 RPTORQ8N122 1335 aa12.33□□□□□ -0.43
TRA2B-214ENST00000487615 PDHXO00330 501 aa12.33□□□□□ -0.43
TRA2B-214ENST00000487615 GYG2O15488 501 aa12.33□□□□□ -0.43
TRA2B-214ENST00000487615 RPSAP08865 295 aaKnown RBP12.33□□□□□ -0.43
TRA2B-214ENST00000487615 ICE2Q659A1 982 aa12.33□□□□□ -0.43
TRA2B-214ENST00000487615 FOXR1Q6PIV2 292 aa12.33□□□□□ -0.43
TRA2B-214ENST00000487615 MICAL1Q8TDZ2 1067 aa12.33□□□□□ -0.43
TRA2B-214ENST00000487615 C12orf42Q96LP6 360 aa12.33□□□□□ -0.43
TRA2B-214ENST00000487615 DHX33Q9H6R0 707 aaKnown RBP12.33□□□□□ -0.43
TRA2B-214ENST00000487615 UBN1Q9NPG3 1134 aa12.33□□□□□ -0.43
TRA2B-214ENST00000487615 PRDM4Q9UKN5 801 aa12.33□□□□□ -0.43
TRA2B-214ENST00000487615 CNTNAP1P78357 1384 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 ZWINTO95229 277 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 TYK2P29597 1187 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 IFI35P80217 286 aaPredicted RBP12.33□□□□□ -0.44
TRA2B-214ENST00000487615 LVRNQ6Q4G3 990 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRA2B-214ENST00000487615 OSMRQ99650 979 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 PLEKHA5Q9HAU0 1116 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 XPNPEP1Q9NQW7 623 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 SETD4Q9NVD3 440 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRA2B-214ENST00000487615 CPSF3Q9UKF6 684 aaKnown RBP12.33□□□□□ -0.44
TRA2B-214ENST00000487615 CCDC195A0A1B0GUA6 201 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 BCAT1P54687 386 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 FBXO36Q8NEA4 188 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 RAB3IL1Q8TBN0 382 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 VCXQ9H320 206 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 ABHD16BQ9H3Z7 469 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 NOP53Q9NZM5 478 aaKnown RBP12.33□□□□□ -0.44
TRA2B-214ENST00000487615 CELF2O95319 508 aaKnown RBP12.33□□□□□ -0.44
TRA2B-214ENST00000487615 MAP3K6O95382 1288 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 SNRPAP09012 282 aaKnown RBP12.33□□□□□ -0.44
TRA2B-214ENST00000487615 SETSIPP0DME0 302 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 KRT4P19013 534 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 HUNKP57058 714 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 DNAJC3Q13217 504 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 PLCB4Q15147 1175 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 LRRC38Q5VT99 294 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 NT5DC4Q86YG4 428 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 NUDCD1Q96RS6 583 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 FSD1LQ9BXM9 530 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 CDT1Q9H211 546 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 ERVK-5Q9HDB9 667 aa12.33□□□□□ -0.44
TRA2B-214ENST00000487615 PFDN6O15212 129 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 GPC4O75487 556 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 HSPA4LO95757 839 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 HMGCRP04035 888 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 GSTA1P08263 222 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 GSTA2P09210 222 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 PCSK1P29120 753 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 PDK1Q15118 436 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 FAXCQ5TGI0 409 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 TSSK1BQ9BXA7 367 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 PDGFDQ9GZP0 370 aaPredicted RBP12.32□□□□□ -0.44
TRA2B-214ENST00000487615 FAM96AQ9H5X1 160 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 GPATCH2LQ9NWQ4 482 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 NINJ2Q9NZG7 142 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 NAALADL1Q9UQQ1 740 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 ZMYM2Q9UBW7 1377 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 MICAL2O94851 1124 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 NUDT17P0C025 328 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 FAM200BP0CF97 657 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 PECAM1P16284 738 aaPredicted RBP12.32□□□□□ -0.44
TRA2B-214ENST00000487615 PAMP19021 973 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 ADSSP30520 456 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 ICAM3P32942 547 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 SERPINB9P50453 376 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 ZNF157P51786 506 aaPredicted RBP12.32□□□□□ -0.44
TRA2B-214ENST00000487615 GNASQ5JWF2 1037 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 LRRC6Q86X45 466 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 AGAP3Q96P47 875 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 APOBEC2Q9Y235 224 aaKnown RBP12.32□□□□□ -0.44
TRA2B-214ENST00000487615 COQ4Q9Y3A0 265 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 ZNF541Q9H0D2 1346 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 MYH10P35580 1976 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 EEF2KO00418 725 aaKnown RBP12.32□□□□□ -0.44
TRA2B-214ENST00000487615 KITP10721 976 aa12.32□□□□□ -0.44
TRA2B-214ENST00000487615 NCF2P19878 526 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms