RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 MROH8Q9H579 483 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 LUC7LQ9NQ29 371 aaKnown RBP7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 ZFP69BQ9UJL9 534 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 ZNF180Q9UJW8 692 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 CTDP1Q9Y5B0 961 aaPredicted RBP7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 FLNBO75369 2602 aaKnown RBP7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 TPRP12270 2363 aaKnown RBP7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 hCG_1642624A0A1W2PR95 340 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 KLHL33A6NCF5 533 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 SLC15A5A6NIM6 579 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 TSPAN6O43657 245 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 PCDHGA12O60330 932 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 DTNBO60941 627 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 SCGB1D2O95969 90 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 IL18BPO95998 194 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 PGK2P07205 417 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 CALM1P0DP23 149 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 CALM2P0DP24 149 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 CALM3P0DP25 149 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 FCER1AP12319 257 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 IGFBP6P24592 240 aaPredicted RBP7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 SMARCA1P28370 1054 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 ADORA2AP29274 412 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 KIF5BP33176 963 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 LIMS1P48059 325 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 AK2P54819 239 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 PRMT2P55345 433 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 CCT2P78371 535 aaKnown RBP7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 SRSF2Q01130 221 aaKnown RBP7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 ADAM9Q13443 819 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 CDC37Q16543 378 aaPredicted RBP7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 CCL14Q16627 93 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 SYNE3Q6ZMZ3 975 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 TMTC3Q6ZXV5 915 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 KANSL1Q7Z3B3 1105 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 MICU3Q86XE3 530 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 CHPFQ8IZ52 775 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 ABRAQ8N0Z2 381 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 STPG3Q8N7X2 389 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 CHST13Q8NET6 341 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 CTCFLQ8NI51 663 aaPredicted RBP7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 KCNN1Q92952 543 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 NOX5Q96PH1 765 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 C11orf84Q9BUA3 381 aaPredicted RBP7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 CDH19Q9H159 772 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 WNT8AQ9H1J5 351 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 OR10A5Q9H207 317 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 GCM1Q9NP62 436 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 FLRT1Q9NZU1 646 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 CROTQ9UKG9 612 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 CCPG1Q9ULG6 757 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 TPCN1Q9ULQ1 816 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 NAP1L2Q9ULW6 460 aaPredicted RBP7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 PCDHGA9Q9Y5G4 932 aaKnown RBP7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 PCDHGA8Q9Y5G5 932 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 PCDHGA7Q9Y5G6 932 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 PCDHGA6Q9Y5G7 932 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 PCDHGA3Q9Y5H0 932 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 PCDHGA2Q9Y5H1 932 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 C5orf42Q9H799 3197 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 SMCHD1A6NHR9 2005 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 BAZ2BQ9UIF8 2168 aaKnown RBP7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 ZSWIM8A7E2V4 1837 aa7.06□□□□□ -1.28
RTFDC1-209ENST00000487211 RPTORQ8N122 1335 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 WDFY4Q6ZS81 3184 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 ZBTB5O15062 677 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 DHX16O60231 1041 aaKnown RBP7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 PCDH8O95206 1070 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 HOXC6P09630 235 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 ZSCAN20P17040 1043 aaPredicted RBP7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 APEX1P27695 318 aaKnown RBP7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 RECQLP46063 649 aaPredicted RBP7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 GNAQP50148 359 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 METAP2P50579 478 aaKnown RBP eCLIP7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 BCAR1P56945 870 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 DLG4P78352 724 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 KRT85P78386 507 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 IL13RA1P78552 427 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 CNTN2Q02246 1040 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 STK3Q13188 491 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 BAATQ14032 418 aaPredicted RBP7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 USH1GQ495M9 461 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 PITRM1Q5JRX3 1037 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 DPP9Q86TI2 863 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 WDR75Q8IWA0 830 aaKnown RBP7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 KYQ8NBH2 561 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 RAET1EQ8TD07 263 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 TRIB2Q92519 343 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 ZNF274Q96GC6 653 aaPredicted RBP7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 SPZ1Q9BXG8 430 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 KCTD10Q9H3F6 313 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 A1CFQ9NQ94 594 aaKnown RBP7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 RNF146Q9NTX7 359 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 INVSQ9Y283 1065 aa7.05□□□□□ -1.28
RTFDC1-209ENST00000487211 ASTN1O14525 1302 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 PARP14Q460N5 1801 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 ABLIM3O94929 683 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 LARGE1O95461 756 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 PFKMP08237 780 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms