RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 TOP6BLQ8N6T0 577 aa10.36□□□□□ -0.75
CCM2-210ENST00000478169 KIAA1958Q8N8K9 716 aa10.36□□□□□ -0.75
CCM2-210ENST00000478169 C1orf127Q8N9H9 656 aa10.36□□□□□ -0.75
CCM2-210ENST00000478169 STKLD1Q8NE28 680 aa10.36□□□□□ -0.75
CCM2-210ENST00000478169 CEP295NLQ96MC4 621 aa10.36□□□□□ -0.75
CCM2-210ENST00000478169 SLC22A12Q96S37 553 aa10.36□□□□□ -0.75
CCM2-210ENST00000478169 STRA6Q9BX79 667 aa10.36□□□□□ -0.75
CCM2-210ENST00000478169 TRPC7Q9HCX4 862 aa10.36□□□□□ -0.75
CCM2-210ENST00000478169 GCNT4Q9P109 453 aa10.36□□□□□ -0.75
CCM2-210ENST00000478169 GTF3C4Q9UKN8 822 aa10.36□□□□□ -0.75
CCM2-210ENST00000478169 ITGA11Q9UKX5 1188 aa10.36□□□□□ -0.75
CCM2-210ENST00000478169 L1RE1Q9UN81 338 aa10.36□□□□□ -0.75
CCM2-210ENST00000478169 ARHGAP26Q9UNA1 814 aa10.36□□□□□ -0.75
CCM2-210ENST00000478169 WNT6Q9Y6F9 365 aa10.36□□□□□ -0.75
CCM2-210ENST00000478169 LNP1A1A4G5 178 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 GABRDO14764 452 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 ITGB3P05106 788 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 CEACAM1P13688 526 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 HDCP19113 662 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 CSRP1P21291 193 aaKnown RBP10.35□□□□□ -0.75
CCM2-210ENST00000478169 GARTP22102 1010 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 ACAT1P24752 427 aaKnown RBP10.35□□□□□ -0.75
CCM2-210ENST00000478169 MAGEA11P43364 429 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 RBP5P82980 135 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 KCNB1Q14721 858 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 RABEP1Q15276 862 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 FAM171BQ6P995 826 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 UNQ6494/PRO21346Q6UXR6 183 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 DPH6Q7L8W6 267 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 SFR1Q86XK3 245 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 CSGALNACT2Q8N6G5 542 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 ARL14EPQ8N8R7 260 aaPredicted RBP10.35□□□□□ -0.75
CCM2-210ENST00000478169 CXorf38Q8TB03 319 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 SH3RF2Q8TEC5 729 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 USP33Q8TEY7 942 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 SPATA17Q96L03 361 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 CNOT6LQ96LI5 555 aaKnown RBP10.35□□□□□ -0.75
CCM2-210ENST00000478169 ACCSQ96QU6 501 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 FAM213AQ9BRX8 229 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 LINC00597Q9H2U6 94 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 MRPL44Q9H9J2 332 aaKnown RBP10.35□□□□□ -0.75
CCM2-210ENST00000478169 TMEM9BQ9NQ34 198 aa10.35□□□□□ -0.75
CCM2-210ENST00000478169 C2orf78A6NCI8 922 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 K7EQS6 105 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 GIPC1O14908 333 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 GAP43P17677 238 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 OPRD1P41143 372 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 WNT7BP56706 349 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 MRPS21P82921 87 aaKnown RBP10.34□□□□□ -0.75
CCM2-210ENST00000478169 GRIN1Q05586 938 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 KCNA1Q09470 495 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 ZNF252P-AS1Q0IIN9 211 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 MAPRE1Q15691 268 aaKnown RBP10.34□□□□□ -0.75
CCM2-210ENST00000478169 SOWAHAQ2M3V2 549 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 C2orf27AQ580R0 203 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 L1TD1Q5T7N2 865 aaKnown RBP10.34□□□□□ -0.75
CCM2-210ENST00000478169 SH3PXD2AQ5TCZ1 1133 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 VSTM1Q6UX27 236 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 C4orf50Q6ZRC1 276 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 DYMQ7RTS9 669 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 CYP2U1Q7Z449 544 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 BRAPQ7Z569 592 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 OSTM1Q86WC4 334 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 SCN4BQ8IWT1 228 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 ADGRF2Q8IZF7 708 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 KDF1Q8NAX2 398 aaPredicted RBP10.34□□□□□ -0.75
CCM2-210ENST00000478169 TTC16Q8NEE8 873 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 IKZF4Q9H2S9 585 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 RBAKQ9NYW8 714 aaPredicted RBP10.34□□□□□ -0.75
CCM2-210ENST00000478169 EHD2Q9NZN4 543 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 MAGEC2Q9UBF1 373 aaPredicted RBP10.34□□□□□ -0.75
CCM2-210ENST00000478169 STK17AQ9UEE5 414 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 MMP17Q9ULZ9 603 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 WASF3Q9UPY6 502 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 PCDHB13Q9Y5F0 798 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 SNX9Q9Y5X1 595 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 IGF2RP11717 2491 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 ATRXP46100 2492 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 CACNA1EQ15878 2313 aa10.34□□□□□ -0.75
CCM2-210ENST00000478169 BAHCC1Q9P281 2608 aa10.33□□□□□ -0.76
CCM2-210ENST00000478169 TMEM8BA6NDV4 472 aa10.33□□□□□ -0.76
CCM2-210ENST00000478169 C1QTNF9BB2RNN3 333 aa10.33□□□□□ -0.76
CCM2-210ENST00000478169 CDX4O14627 284 aaPredicted RBP10.33□□□□□ -0.76
CCM2-210ENST00000478169 SLC9A3R1O14745 358 aaPredicted RBP10.33□□□□□ -0.76
CCM2-210ENST00000478169 ALDH1A2O94788 518 aa10.33□□□□□ -0.76
CCM2-210ENST00000478169 KRT19P08727 400 aa10.33□□□□□ -0.76
CCM2-210ENST00000478169 C1QTNF9P0C862 333 aa10.33□□□□□ -0.76
CCM2-210ENST00000478169 PPP3CCP48454 512 aa10.33□□□□□ -0.76
CCM2-210ENST00000478169 FOXC1Q12948 553 aa10.33□□□□□ -0.76
CCM2-210ENST00000478169 MYO1EQ12965 1108 aa10.33□□□□□ -0.76
CCM2-210ENST00000478169 ALCAMQ13740 583 aa10.33□□□□□ -0.76
CCM2-210ENST00000478169 SF3A1Q15459 793 aaKnown RBP10.33□□□□□ -0.76
CCM2-210ENST00000478169 CRY1Q16526 586 aa10.33□□□□□ -0.76
CCM2-210ENST00000478169 HSF5Q4G112 596 aaPredicted RBP10.33□□□□□ -0.76
CCM2-210ENST00000478169 LARP1BQ659C4 914 aaKnown RBP10.33□□□□□ -0.76
CCM2-210ENST00000478169 ANO7Q6IWH7 933 aa10.33□□□□□ -0.76
CCM2-210ENST00000478169 DENND5BQ6ZUT9 1274 aa10.33□□□□□ -0.76
CCM2-210ENST00000478169 LIMS2Q7Z4I7 341 aa10.33□□□□□ -0.76
CCM2-210ENST00000478169 ADGRG2Q8IZP9 1017 aa10.33□□□□□ -0.76
CCM2-210ENST00000478169 OLIG1Q8TAK6 271 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms