RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 SNX25Q9H3E2 840 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 VRTNQ9H8Y1 702 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 PRMT8Q9NR22 394 aaPredicted RBP11.54□□□□□ -0.56
SEC13-214ENST00000476597 GKN1Q9NS71 199 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 TDP1Q9NUW8 608 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 CCL26Q9Y258 94 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 NME7Q9Y5B8 376 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 LRRIQ3A6PVS8 624 aaPredicted RBP11.53□□□□□ -0.56
SEC13-214ENST00000476597 PHACTR2O75167 634 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 TADA3O75528 432 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 RHOBTB3O94955 611 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 PTPN1P18031 435 aaKnown RBP11.53□□□□□ -0.56
SEC13-214ENST00000476597 CTHP32929 405 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 GRIK1P39086 918 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 TNNC1P63316 161 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 TNK2Q07912 1038 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 GAS6Q14393 721 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 ITPRIPL2Q3MIP1 535 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 WDR44Q5JSH3 913 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 TDRD10Q5VZ19 366 aaKnown RBP11.53□□□□□ -0.56
SEC13-214ENST00000476597 TSSK4Q6SA08 328 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 KRBA2Q6ZNG9 492 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 SUMF1Q8NBK3 374 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 PCED1BQ96HM7 432 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 FAM126AQ9BYI3 521 aaPredicted RBP11.53□□□□□ -0.56
SEC13-214ENST00000476597 KIF9Q9HAQ2 790 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 ZSCAN32Q9NX65 697 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 TRAF3IP3Q9Y228 551 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 PCDHGA2Q9Y5H1 932 aa11.53□□□□□ -0.56
SEC13-214ENST00000476597 TSC2P49815 1807 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 A8MXQ7 604 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 KINO60870 393 aaKnown RBP11.52□□□□□ -0.57
SEC13-214ENST00000476597 LILRB5O75023 590 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 NR3C1P04150 777 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 TDGF1P13385 188 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 DLG4P78352 724 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 CYP27A1Q02318 531 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 DPYDQ12882 1025 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 BIRC3Q13489 604 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 RUNX3Q13761 415 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 MDH1BQ5I0G3 518 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 DGKKQ5KSL6 1271 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 DENND5BQ6ZUT9 1274 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 FSIP1Q8NA03 581 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 RIN3Q8TB24 985 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 TMC2Q8TDI7 906 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 ATRIPQ8WXE1 791 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 C8orf48Q96LL4 319 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 SLC22A12Q96S37 553 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 CYP2S1Q96SQ9 504 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 TTLL2Q9BWV7 592 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 GOLPH3LQ9H4A5 285 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 HPS4Q9NQG7 708 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 RBM12Q9NTZ6 932 aaKnown RBP11.52□□□□□ -0.57
SEC13-214ENST00000476597 GCNT4Q9P109 453 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 NXF1Q9UBU9 619 aaKnown RBP11.52□□□□□ -0.57
SEC13-214ENST00000476597 OTOGLQ3ZCN5 2332 aa11.52□□□□□ -0.57
SEC13-214ENST00000476597 OTOL1A6NHN0 477 aaPredicted RBP11.51□□□□□ -0.57
SEC13-214ENST00000476597 IKBKBO14920 756 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 TRIM66O15016 1216 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 MAPK13O15264 365 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 CALUO43852 315 aaPredicted RBP11.51□□□□□ -0.57
SEC13-214ENST00000476597 ZNF202O95125 648 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 KIF20AO95235 890 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 VNN1O95497 513 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 USP17L7P0C7H9 530 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 PRR29P0C7W0 189 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 ANXA13P27216 316 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 CXCL12P48061 93 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 CCR3P51677 355 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 CDH8P55286 799 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 USP46P62068 366 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 FAM160A1Q05DH4 1040 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 NCOA4Q13772 614 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 LRRC32Q14392 662 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 KCNB1Q14721 858 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 PON2Q15165 354 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 NFIL3Q16649 462 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 SGSM1Q2NKQ1 1148 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 ZACNQ401N2 412 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 C1orf220Q5T0J3 134 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 TRIM68Q6AZZ1 485 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 CC2D1AQ6P1N0 951 aaPredicted RBP11.51□□□□□ -0.57
SEC13-214ENST00000476597 SYNPOQ8N3V7 929 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 SPEM1Q8N4L4 309 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 CCDC47Q96A33 483 aaKnown RBP11.51□□□□□ -0.57
SEC13-214ENST00000476597 DPEP3Q9H4B8 488 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 TRPC7Q9HCX4 862 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 EHD2Q9NZN4 543 aa11.51□□□□□ -0.57
SEC13-214ENST00000476597 DMXL1Q9Y485 3027 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 TRAV19A0A0A6YYK7 116 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 C2orf78A6NCI8 922 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 F8VP50 259 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 TRDMT1O14717 391 aaKnown RBP11.5□□□□□ -0.57
SEC13-214ENST00000476597 PAPSS2O95340 614 aaPredicted RBP11.5□□□□□ -0.57
SEC13-214ENST00000476597 TCF3P15923 654 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 PFKLP17858 780 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 HDCP19113 662 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 PPP3CCP48454 512 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 CACNA2D1P54289 1103 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms