RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 TEX33O43247 280 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 TGM5O43548 720 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 C1RP00736 705 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 PRKCBP05771 671 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 ZNF16P17020 682 aaPredicted RBP6.87□□□□□ -1.31
HDAC1-205ENST00000472928 SCP2P22307 547 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 SFPQP23246 707 aaKnown RBP eCLIP6.87□□□□□ -1.31
HDAC1-205ENST00000472928 NOS2P35228 1153 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 GLUD2P49448 558 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 CASP4P49662 377 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 LIG4P49917 911 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 DNM2P50570 870 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 RAB27AP51159 221 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 NTHL1P78549 312 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 SHC2P98077 582 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 DSG1Q02413 1049 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 UBXN1Q04323 297 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 SPEM2Q0P670 501 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 STRN3Q13033 797 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 ADAM9Q13443 819 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 MXD4Q14582 209 aaPredicted RBP6.87□□□□□ -1.31
HDAC1-205ENST00000472928 LPAL2Q16609 132 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 DCAF17Q5H9S7 520 aaPredicted RBP6.87□□□□□ -1.31
HDAC1-205ENST00000472928 MIIPQ5JXC2 388 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 UBXN11Q5T124 520 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 FKBP15Q5T1M5 1219 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 CDCA2Q69YH5 1023 aaPredicted RBP6.87□□□□□ -1.31
HDAC1-205ENST00000472928 SLC39A4Q6P5W5 647 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 RSPO2Q6UXX9 243 aaPredicted RBP6.87□□□□□ -1.31
HDAC1-205ENST00000472928 MRPL10Q7Z7H8 261 aaKnown RBP6.87□□□□□ -1.31
HDAC1-205ENST00000472928 RHPN2Q8IUC4 686 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 COLGALT2Q8IYK4 626 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 FAM186BQ8IYM0 893 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 RNF149Q8NC42 400 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 PRPF31Q8WWY3 499 aaKnown RBP6.87□□□□□ -1.31
HDAC1-205ENST00000472928 HPS1Q92902 700 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 FDXACB1Q9BRP7 624 aaPredicted RBP6.87□□□□□ -1.31
HDAC1-205ENST00000472928 CBWD1Q9BRT8 395 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 RBCK1Q9BYM8 510 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 C2orf40Q9H1Z8 148 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 PLEKHA4Q9H4M7 779 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 PCIF1Q9H4Z3 704 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 PIDD1Q9HB75 910 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 CHST7Q9NS84 486 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 ZDHHC7Q9NXF8 308 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 HSPBP1Q9NZL4 362 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 STIM2Q9P246 746 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 CGNQ9P2M7 1197 aaKnown RBP6.87□□□□□ -1.31
HDAC1-205ENST00000472928 ANKFY1Q9P2R3 1169 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 DPP7Q9UHL4 492 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 CDH7Q9ULB5 785 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 ZNF232Q9UNY5 417 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 FRMD4BQ9Y2L6 1034 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 FAN1Q9Y2M0 1017 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 PCDHB2Q9Y5E7 798 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 NOTCH4Q99466 2003 aa6.87□□□□□ -1.31
HDAC1-205ENST00000472928 ASH1LQ9NR48 2969 aaKnown RBP6.87□□□□□ -1.31
HDAC1-205ENST00000472928 IGSF10Q6WRI0 2623 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 LAMA1P25391 3075 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 NBEAQ8NFP9 2946 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 ITIH6Q6UXX5 1313 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 ANKRD63C9JTQ0 380 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 EXOC3O60645 756 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 LRP3O75074 770 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 AKAP3O75969 853 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 POMCP01189 267 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 PIGRP01833 764 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 ALDH2P05091 517 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 EDN1P05305 212 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 RETP07949 1114 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 SRGAP2CP0DJJ0 459 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 HARSP12081 509 aaKnown RBP6.86□□□□□ -1.31
HDAC1-205ENST00000472928 PBX1P40424 430 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 MATR3P43243 847 aaKnown RBP eCLIP6.86□□□□□ -1.31
HDAC1-205ENST00000472928 RPS9P46781 194 aaKnown RBP6.86□□□□□ -1.31
HDAC1-205ENST00000472928 EIF1AXP47813 144 aaKnown RBP6.86□□□□□ -1.31
HDAC1-205ENST00000472928 EFNA5P52803 228 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 GSDMDP57764 484 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 DSC1Q08554 894 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 MTAPQ13126 283 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 NR1I3Q14994 352 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 ACAP1Q15027 740 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 ZBTB41Q5SVQ8 909 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 N4BP2L1Q5TBK1 243 aaPredicted RBP6.86□□□□□ -1.31
HDAC1-205ENST00000472928 TCERG1LQ5VWI1 586 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 SPECC1LQ69YQ0 1117 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 LAIR1Q6GTX8 287 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 ELMSAN1Q6PJG2 1045 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 TPRG1Q6ZUI0 275 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 CCDC186Q7Z3E2 898 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 GRASPQ7Z6J2 395 aaPredicted RBP6.86□□□□□ -1.31
HDAC1-205ENST00000472928 PALB2Q86YC2 1186 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 TRIM59Q8IWR1 403 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 C12orf56Q8IXR9 622 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 ALDH16A1Q8IZ83 802 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 RGL4Q8IZJ4 473 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 CCDC150Q8NCX0 1101 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 URGCPQ8TCY9 931 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 RHBDD1Q8TEB9 315 aa6.86□□□□□ -1.31
HDAC1-205ENST00000472928 POMGNT1Q8WZA1 660 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms