RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 LMO2P25791 158 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 PCSK1P29120 753 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 MPLP40238 635 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 ST3GAL2Q16842 350 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 EML3Q32P44 896 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 FAM173BQ6P4H8 233 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 LIMS2Q7Z4I7 341 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 SCN4BQ8IWT1 228 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 ADGRF2Q8IZF7 708 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 TTC16Q8NEE8 873 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 SH3RF2Q8TEC5 729 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 CD101Q93033 1021 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 EXOC4Q96A65 974 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 FUBP3Q96I24 572 aaKnown RBP eCLIP13.13□□□□□ -0.31
COL5A1-207ENST00000469093 CHAMP1Q96JM3 812 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 MTMR12Q9C0I1 747 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 DUSP15Q9H1R2 295 aaPredicted RBP13.13□□□□□ -0.31
COL5A1-207ENST00000469093 VPS45Q9NRW7 570 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 EBF1Q9UH73 591 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 TCHHQ07283 1943 aa13.13□□□□□ -0.31
COL5A1-207ENST00000469093 ABCA7Q8IZY2 2146 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 GREB1Q4ZG55 1949 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 VPS37CA5D8V6 355 aaPredicted RBP13.12□□□□□ -0.31
COL5A1-207ENST00000469093 PRPF6O94906 941 aaKnown RBP13.12□□□□□ -0.31
COL5A1-207ENST00000469093 APBB3O95704 486 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 PMLP29590 882 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 MAGEA11P43364 429 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 IFNAR2P48551 515 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 ZXDBP98169 803 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 CEBPZQ03701 1054 aaKnown RBP13.12□□□□□ -0.31
COL5A1-207ENST00000469093 CUL4AQ13619 759 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 ALCAMQ13740 583 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 DMC1Q14565 340 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 CCDC73Q6ZRK6 1079 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 DPH6Q7L8W6 267 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 FSIP1Q8NA03 581 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 OR5B17Q8NGF7 314 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 NOC3LQ8WTT2 800 aaKnown RBP13.12□□□□□ -0.31
COL5A1-207ENST00000469093 KBTBD7Q8WVZ9 684 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 ATP2A3Q93084 1043 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 HPDLQ96IR7 371 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 LSM14BQ9BX40 385 aaKnown RBP13.12□□□□□ -0.31
COL5A1-207ENST00000469093 PANK4Q9NVE7 773 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 INTS13Q9NVM9 706 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 ARHGAP26Q9UNA1 814 aa13.12□□□□□ -0.31
COL5A1-207ENST00000469093 A0A087X0B3 334 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 ANTXRLA6NF34 631 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 RHOBTB1O94844 696 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 PDGFRBP09619 1106 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 TMEM191BP0C7N4 346 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 TCF3P15923 654 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 TXLNAP40222 546 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 USP4Q13107 963 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 NR1H3Q13133 447 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 PSMD2Q13200 908 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 LMBRD2Q68DH5 695 aaPredicted RBP13.11□□□□□ -0.31
COL5A1-207ENST00000469093 TCEAL6Q6IPX3 200 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 VSTM1Q6UX27 236 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 GPD1LQ8N335 351 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 TCEAL3Q969E4 200 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 SPATA17Q96L03 361 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 SYT15Q9BQS2 421 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 CRTAC1Q9NQ79 661 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 MAGEC2Q9UBF1 373 aaPredicted RBP13.11□□□□□ -0.31
COL5A1-207ENST00000469093 CDH9Q9ULB4 789 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 PTPRJQ12913 1337 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 GON4LQ3T8J9 2241 aa13.11□□□□□ -0.31
COL5A1-207ENST00000469093 BCLAF3A2AJT9 711 aaKnown RBP13.1□□□□□ -0.31
COL5A1-207ENST00000469093 ZNF233A6NK53 670 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 K7EQS6 105 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 KIAA0391O15091 583 aaKnown RBP13.1□□□□□ -0.31
COL5A1-207ENST00000469093 KCNK5O95279 499 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 PDCP20941 246 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 BDNFP23560 247 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 GRIK1P39086 918 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 STAT6P42226 847 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 USP46P62068 366 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 PSMC1P62191 440 aaKnown RBP13.1□□□□□ -0.31
COL5A1-207ENST00000469093 SHC2P98077 582 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 CREB5Q02930 508 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 MYO1EQ12965 1108 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 RESTQ13127 1097 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 KCNB1Q14721 858 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 ELF2Q15723 593 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 DUOXA2Q1HG44 320 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 GAB4Q2WGN9 574 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 RNF43Q68DV7 783 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 C4orf50Q6ZRC1 276 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 CBWD2Q8IUF1 395 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 ADGRG2Q8IZP9 1017 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 GLIS3Q8NEA6 775 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 USP33Q8TEY7 942 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 ACDQ96AP0 544 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 ANKRD36BP1Q96IX9 119 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 CEP295NLQ96MC4 621 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 RNF38Q9H0F5 515 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 UPF2Q9HAU5 1272 aaKnown RBP13.1□□□□□ -0.31
COL5A1-207ENST00000469093 ANGPTL2Q9UKU9 493 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 INVSQ9Y283 1065 aa13.1□□□□□ -0.31
COL5A1-207ENST00000469093 R3HCC1Q9Y3T6 440 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms