RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 C12orf56Q8IXR9 622 aa11.36□□□□□ -0.59
TGFBR3-205ENST00000468996 ARL14EPQ8N8R7 260 aaPredicted RBP11.36□□□□□ -0.59
TGFBR3-205ENST00000468996 SUMF1Q8NBK3 374 aa11.36□□□□□ -0.59
TGFBR3-205ENST00000468996 KIAA0895Q8NCT3 520 aa11.36□□□□□ -0.59
TGFBR3-205ENST00000468996 ELMO3Q96BJ8 720 aa11.36□□□□□ -0.59
TGFBR3-205ENST00000468996 TRMT2BQ96GJ1 504 aaKnown RBP11.36□□□□□ -0.59
TGFBR3-205ENST00000468996 MSANTD3Q96H12 275 aa11.36□□□□□ -0.59
TGFBR3-205ENST00000468996 PCED1BQ96HM7 432 aa11.36□□□□□ -0.59
TGFBR3-205ENST00000468996 MYRFLQ96LU7 910 aa11.36□□□□□ -0.59
TGFBR3-205ENST00000468996 SLC22A12Q96S37 553 aa11.36□□□□□ -0.59
TGFBR3-205ENST00000468996 FAM83CQ9BQN1 747 aa11.36□□□□□ -0.59
TGFBR3-205ENST00000468996 NCDNQ9UBB6 729 aa11.36□□□□□ -0.59
TGFBR3-205ENST00000468996 USP25Q9UHP3 1055 aa11.36□□□□□ -0.59
TGFBR3-205ENST00000468996 FAM186AA6NE01 2351 aa11.36□□□□□ -0.59
TGFBR3-205ENST00000468996 TCHHQ07283 1943 aa11.36□□□□□ -0.59
TGFBR3-205ENST00000468996 C2orf78A6NCI8 922 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 SOBPA7XYQ1 873 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 TACC1O75410 805 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 NR3C1P04150 777 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 RPN1P04843 607 aaKnown RBP11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 USP17L7P0C7H9 530 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 ARSAP15289 507 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 ATICP31939 592 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 CCR3P51677 355 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 IFRD2Q12894 506 aaPredicted RBP11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 GAS6Q14393 721 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 DGKKQ5KSL6 1271 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 CEP135Q66GS9 1140 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 HEATR6Q6AI08 1181 aaKnown RBP11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 VSTM1Q6UX27 236 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 MAMSTRQ6ZN01 415 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 Q6ZS52 159 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 DENND5BQ6ZUT9 1274 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 SPEM1Q8N4L4 309 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 ZBTB44Q8NCP5 570 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 PLEKHO2Q8TD55 490 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 PARD3BQ8TEW8 1205 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 CCDC47Q96A33 483 aaKnown RBP11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 SYAP1Q96A49 352 aaPredicted RBP11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 SPATA17Q96L03 361 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 FAM126AQ9BYI3 521 aaPredicted RBP11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 GZF1Q9H116 711 aaPredicted RBP11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 DPEP3Q9H4B8 488 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 PRMT8Q9NR22 394 aaPredicted RBP11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 DUS2Q9NX74 493 aaKnown RBP11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 TRPM5Q9NZQ8 1165 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 MAPK8IP1Q9UQF2 711 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 NME7Q9Y5B8 376 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 ATP6V1DQ9Y5K8 247 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 MIA3Q5JRA6 1907 aa11.35□□□□□ -0.59
TGFBR3-205ENST00000468996 OTOL1A6NHN0 477 aaPredicted RBP11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 LRRIQ3A6PVS8 624 aaPredicted RBP11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 F8VP50 259 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 CLDN5O00501 218 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 PDXKO00764 312 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 TRIM66O15016 1216 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 TADA3O75528 432 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 FAM163BP0C2L3 166 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 RAP1GAPP47736 663 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 ID4P47928 161 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 AP3M2P53677 418 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 USP46P62068 366 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 DLG4P78352 724 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 AMPD2Q01433 879 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 FAM160A1Q05DH4 1040 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 GRSF1Q12849 480 aaKnown RBP eCLIP11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 NCOA4Q13772 614 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 KCNB1Q14721 858 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 PDGFRLQ15198 375 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 LPAL2Q16609 132 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 ZNF699Q32M78 642 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 ZNF667Q5HYK9 610 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 TDRD10Q5VZ19 366 aaKnown RBP11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 SH3RF2Q8TEC5 729 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 NELL1Q92832 810 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 IER2Q9BTL4 223 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 MED10Q9BTT4 135 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 B3GNT5Q9BYG0 378 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 ZNF518BQ9C0D4 1074 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 SCAND2PQ9GZW5 306 aaPredicted RBP11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 XYLT2Q9H1B5 865 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 KCTD10Q9H3F6 313 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 SMYD3Q9H7B4 428 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 KIF9Q9HAQ2 790 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 GDPD2Q9HCC8 539 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 HPS4Q9NQG7 708 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.34□□□□□ -0.592e-6■■■■■ 149.1
TGFBR3-205ENST00000468996 DMAC2Q9NW81 257 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 HPSEQ9Y251 543 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 FRMD4BQ9Y2L6 1034 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 WNT6Q9Y6F9 365 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 TSC2P49815 1807 aa11.34□□□□□ -0.59
TGFBR3-205ENST00000468996 SPTBN4Q9H254 2564 aa11.33□□□□□ -0.6
TGFBR3-205ENST00000468996 TICRRQ7Z2Z1 1910 aa11.33□□□□□ -0.6
TGFBR3-205ENST00000468996 ZNF292O60281 2723 aa11.33□□□□□ -0.6
TGFBR3-205ENST00000468996 CHURC1-FNTBB4DL54 471 aa11.33□□□□□ -0.6
TGFBR3-205ENST00000468996 CALUO43852 315 aaPredicted RBP11.33□□□□□ -0.6
TGFBR3-205ENST00000468996 KIF20AO95235 890 aa11.33□□□□□ -0.6
TGFBR3-205ENST00000468996 C4BPAP04003 597 aaKnown RBP11.33□□□□□ -0.6
TGFBR3-205ENST00000468996 MYL1P05976 194 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms