RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 NGDNQ8NEJ9 315 aaKnown RBP4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 OR1N1Q8NGS0 311 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 OR6Y1Q8NGX8 325 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 ZFP28Q8NHY6 868 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 SCAMP5Q8TAC9 235 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 PPP2R3CQ969Q6 453 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 ERP27Q96DN0 273 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 SLC46A1Q96NT5 459 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 SMOQ99835 787 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 TCF25Q9BQ70 676 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 SPATA25Q9BR10 227 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 SDF4Q9BRK5 362 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 SPATA5L1Q9BVQ7 753 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 CHODLQ9H9P2 273 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 KCNK12Q9HB15 430 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 PREBQ9HCU5 417 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 CLIC5Q9NZA1 410 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 CDYLQ9Y232 598 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 HPSEQ9Y251 543 aa4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 RRP7AQ9Y3A4 280 aaKnown RBP4.23□□□□□ -1.73
HMGB1P25-201ENST00000468402 CCDC196A0A1B0GTZ2 297 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 TEX51A0A1B0GUA7 166 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 MYOCOSA0A1B0GUC4 107 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 TBKBP1A7MCY6 615 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 B5MCH6 92 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 H0Y3Z8 333 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 CCER2I3L3R5 266 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 PJA2O43164 708 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 HOXA3O43365 443 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 PEX10O60683 326 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 FAM155BO75949 473 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 GLP2RO95838 553 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 CKBP12277 381 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 SLC6A2P23975 617 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 IGFBP6P24592 240 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 RPL13P26373 211 aaKnown RBP4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 ZEB1P37275 1124 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 RBM5P52756 815 aaKnown RBP eCLIP4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 PTTG1IPP53801 180 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 CLNS1AP54105 237 aaKnown RBP4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 WNT3P56703 355 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 GPS1Q13098 491 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 PRKG2Q13237 762 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 KRT32Q14532 448 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 SLC5A9Q2M3M2 681 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 BTBD16Q32M84 506 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 P3H1Q32P28 736 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 SLC45A4Q5BKX6 768 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 HAUS3Q68CZ6 603 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 MED25Q71SY5 747 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 RAB11FIP2Q7L804 512 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 FRMD5Q7Z6J6 570 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 RALYLQ86SE5 291 aaKnown RBP4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 HERC6Q8IVU3 1022 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 LRRC56Q8IYG6 542 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 SPARTQ8N0X7 666 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 RNF169Q8NCN4 708 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 PDPRQ8NCN5 879 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 NSUN7Q8NE18 718 aaKnown RBP4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 DNERQ8NFT8 737 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 ZNF384Q8TF68 577 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 WDR60Q8WVS4 1066 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 THAP4Q8WY91 577 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 KCNN1Q92952 543 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 AJUBAQ96IF1 538 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 TIGD1Q96MW7 591 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 KLHL32Q96NJ5 620 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 RBM15Q96T37 977 aaKnown RBP eCLIP4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 GPHA2Q96T91 129 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 CPPED1Q9BRF8 314 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 NUDT16L1Q9BRJ7 211 aaKnown RBP4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 GPR63Q9BZJ6 419 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 MCOLN1Q9GZU1 580 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 SLC25A32Q9H2D1 315 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 NOD2Q9HC29 1040 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 HELLSQ9NRZ9 838 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 NTMQ9P121 344 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 LPAR3Q9UBY5 353 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 SHOC2Q9UQ13 582 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 SLC45A1Q9Y2W3 748 aa4.22□□□□□ -1.73
HMGB1P25-201ENST00000468402 NCANO14594 1321 aa4.21□□□□□ -1.73
HMGB1P25-201ENST00000468402 PNPLA7Q6ZV29 1317 aa4.21□□□□□ -1.73
HMGB1P25-201ENST00000468402 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 PNMA6EA0A0J9YXQ4 647 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 A0A1W2PPH5 198 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 FSD2A1L4K1 749 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 E7EVH7 732 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 J3KTA2 159 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 EXOC5O00471 708 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 CCP110O43303 1012 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 KCNQ3O43525 872 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 RRP9O43818 475 aaKnown RBP4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 ZBED4O75132 1171 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 PPP6R2O75170 966 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 TIPRLO75663 272 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 STC2O76061 302 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 PRKCBP05771 671 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 KLRK1P26718 216 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms