RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 CYP2C9P11712 490 aa5.26□□□□□ -1.57
LRCH3-211ENST00000466054 XRCC6P12956 609 aaKnown RBP eCLIP5.26□□□□□ -1.57
LRCH3-211ENST00000466054 VIPR2P41587 438 aa5.26□□□□□ -1.57
LRCH3-211ENST00000466054 SLC11A2P49281 568 aa5.26□□□□□ -1.57
LRCH3-211ENST00000466054 ANXA11P50995 505 aaKnown RBP5.26□□□□□ -1.57
LRCH3-211ENST00000466054 WNT3P56703 355 aa5.26□□□□□ -1.57
LRCH3-211ENST00000466054 UBE4AQ14139 1066 aa5.26□□□□□ -1.57
LRCH3-211ENST00000466054 TMPRSS9Q7Z410 1059 aa5.26□□□□□ -1.57
LRCH3-211ENST00000466054 COLGALT2Q8IYK4 626 aa5.26□□□□□ -1.57
LRCH3-211ENST00000466054 SVIPQ8NHG7 77 aa5.26□□□□□ -1.57
LRCH3-211ENST00000466054 ZC3H10Q96K80 434 aaKnown RBP5.26□□□□□ -1.57
LRCH3-211ENST00000466054 STRBPQ96SI9 672 aaKnown RBP5.26□□□□□ -1.57
LRCH3-211ENST00000466054 NAA15Q9BXJ9 866 aaKnown RBP5.26□□□□□ -1.57
LRCH3-211ENST00000466054 UNKQ9C0B0 810 aaKnown RBP5.26□□□□□ -1.57
LRCH3-211ENST00000466054 CPNE7Q9UBL6 633 aa5.26□□□□□ -1.57
LRCH3-211ENST00000466054 TMX2Q9Y320 296 aa5.26□□□□□ -1.57
LRCH3-211ENST00000466054 TRIM43BA6NCK2 446 aa5.25□□□□□ -1.57
LRCH3-211ENST00000466054 MBD3L4A6NDZ8 208 aaPredicted RBP5.25□□□□□ -1.57
LRCH3-211ENST00000466054 MBD3L3A6NE82 208 aaPredicted RBP5.25□□□□□ -1.57
LRCH3-211ENST00000466054 RHPN2P1A8MT19 583 aa5.25□□□□□ -1.57
LRCH3-211ENST00000466054 PEX1O43933 1283 aa5.25□□□□□ -1.57
LRCH3-211ENST00000466054 SUN1O94901 812 aa5.25□□□□□ -1.57
LRCH3-211ENST00000466054 UCP3P55916 312 aa5.25□□□□□ -1.57
LRCH3-211ENST00000466054 RPS7P62081 194 aaKnown RBP5.25□□□□□ -1.57
LRCH3-211ENST00000466054 DYRK1AQ13627 763 aa5.25□□□□□ -1.57
LRCH3-211ENST00000466054 HLXQ14774 488 aaPredicted RBP5.25□□□□□ -1.57
LRCH3-211ENST00000466054 CYP2A13Q16696 494 aa5.25□□□□□ -1.57
LRCH3-211ENST00000466054 MTX3Q5HYI7 312 aa5.25□□□□□ -1.57
LRCH3-211ENST00000466054 CRELD2Q6UXH1 353 aaPredicted RBP5.25□□□□□ -1.57
LRCH3-211ENST00000466054 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.25□□□□□ -1.57
LRCH3-211ENST00000466054 MAML1Q92585 1016 aa5.25□□□□□ -1.57
LRCH3-211ENST00000466054 TRIM43Q96BQ3 446 aaPredicted RBP5.25□□□□□ -1.57
LRCH3-211ENST00000466054 APOL5Q9BWW9 433 aa5.25□□□□□ -1.57
LRCH3-211ENST00000466054 A1CFQ9NQ94 594 aaKnown RBP5.25□□□□□ -1.57
LRCH3-211ENST00000466054 SACM1LQ9NTJ5 587 aa5.25□□□□□ -1.57
LRCH3-211ENST00000466054 STK32BQ9NY57 414 aa5.25□□□□□ -1.57
LRCH3-211ENST00000466054 VSX1Q9NZR4 365 aaPredicted RBP5.25□□□□□ -1.57
LRCH3-211ENST00000466054 XPR1Q9UBH6 696 aa5.25□□□□□ -1.57
LRCH3-211ENST00000466054 PRKCGP05129 697 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 ATXN1LP0C7T5 689 aaKnown RBP5.24□□□□□ -1.57
LRCH3-211ENST00000466054 TM4SF4P48230 202 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 VAV2P52735 878 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 AK2P54819 239 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 SATB1Q01826 763 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 CTBP1Q13363 440 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 IQCB1Q15051 598 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 LONRF3Q496Y0 759 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 IL31Q6EBC2 164 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 SESTD1Q86VW0 696 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 DNAJC5GQ8N7S2 189 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 PSD4Q8NDX1 1056 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 SARAFQ96BY9 339 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 LRIG1Q96JA1 1093 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 ADGRE3Q9BY15 652 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 KRTAP2-2Q9BYT5 123 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 PNPLA8Q9NP80 782 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 KCTD5Q9NXV2 234 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 COL20A1Q9P218 1284 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 PHTF1Q9UMS5 762 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 SNX13Q9Y5W8 968 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 RAD54BQ9Y620 910 aa5.24□□□□□ -1.57
LRCH3-211ENST00000466054 ZNF804BA4D1E1 1349 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 ZNF521Q96K83 1311 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 TOR1BO14657 336 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 IL18RAPO95256 599 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 ZKSCAN1P17029 563 aaPredicted RBP5.23□□□□□ -1.57
LRCH3-211ENST00000466054 ITGALP20701 1170 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 KLRC1P26715 233 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 TKTP29401 623 aaKnown RBP5.23□□□□□ -1.57
LRCH3-211ENST00000466054 PIK3CBP42338 1070 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 TOB1P50616 345 aaPredicted RBP5.23□□□□□ -1.57
LRCH3-211ENST00000466054 CASP5P51878 434 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 NEK3P51956 506 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 LOXL3P58215 753 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 FPGSQ05932 587 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 DAG1Q14118 895 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 PREPLQ4J6C6 727 aaPredicted RBP5.23□□□□□ -1.57
LRCH3-211ENST00000466054 TAF2Q6P1X5 1199 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 SLC30A10Q6XR72 485 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 DPP9Q86TI2 863 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 MICU3Q86XE3 530 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 SLC15A4Q8N697 577 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 NSUN7Q8NE18 718 aaKnown RBP5.23□□□□□ -1.57
LRCH3-211ENST00000466054 SNX19Q92543 992 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 NACC2Q96BF6 587 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 SLC46A1Q96NT5 459 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 UNKLQ9H9P5 680 aaKnown RBP5.23□□□□□ -1.57
LRCH3-211ENST00000466054 MRPS18AQ9NVS2 196 aaKnown RBP5.23□□□□□ -1.57
LRCH3-211ENST00000466054 SLC52A1Q9NWF4 448 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 PADI4Q9UM07 663 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 SHOC2Q9UQ13 582 aa5.23□□□□□ -1.57
LRCH3-211ENST00000466054 VPS4BO75351 444 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 IFIT2P09913 472 aaKnown RBP5.22□□□□□ -1.57
LRCH3-211ENST00000466054 LRPAP1P30533 357 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 GCLCP48506 637 aaPredicted RBP5.22□□□□□ -1.57
LRCH3-211ENST00000466054 RPS16P62249 146 aaKnown RBP5.22□□□□□ -1.57
LRCH3-211ENST00000466054 GEN1Q17RS7 908 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 SYCP2LQ5T4T6 812 aa5.22□□□□□ -1.57
LRCH3-211ENST00000466054 TSTD2Q5T7W7 516 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms